| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2044 |
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| Symbol | cpaF |
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| ID | 3689881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 2210839 |
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| End bp | 2212404 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637728500 |
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| Product | component of type IV pilus |
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| Protein accession | YP_333439 |
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| Protein GI | 76810428 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.101478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGGCC GGCGTCCGGC CGCTTCATTC GCGCCCGGCG ACGCCGGCGG CGCGCACGAG
TTCGCGCCCG ACGCCGCGCC GGCGGGTGCG GCGCCGGCCG GCGGCCACGC ATCGGCGCCC
GACGCGAGCG GCGCGGCACG CGCGCGCGAG CCGGCCGGCG TATCGGGCGC GAGCGCGCCC
GGCGGGGCGC CGCAGTCCGG CGTCGCGCCA AGCGGCCATC GGCCCGCATC GCGTGACGAC
CGCATCGACC GCATCGATCG CGATGACGGC CACGACCGCG CGCCCGCGCA AGACCACCAC
GAGGCGCTGA TCCGCTCGGA GACGTTCAAG ACGATCCGCG CGGTCGTGTT CTCGTCGATG
AACATGTCGG CCGCGCTGAT GATGTCGCGC GCCGAAGTGC GCGAAGGCAT CGAGCAGGCG
GCCGCCGACG TGATCGCGCG CGAGCGGCTG ACGGTGACGC TCGCCGAGCA GGCGCTCATC
GTCGACGAGA TCCTCAACGA CATGTTCGGC GTCGGGCCGA TCGAGCCGTT GCTCGCCGAC
GAACGCGTGA CCGACATCCT CGTCAACGGC CCCGATCAGG TGTACGTCGA GCGCGCCGGC
AAGCTCGAGC TCACGCCGCT GAAGTTCCGC GACAACGCGC ACGTGATCAA CGTCGCGCAG
CGGATCGCGG CGGCGGTCGG GCGGCGCGTC GACGAGAGCA GCCCGATGGT CGACGCGCGG
CTCGCGGACG GCAGCCGCGT GAACGTCGTG CTGCCGCCGA TCGCGATCCG CGGCGCGTCG
ATCTCGATCC GCAAGTTCGC CAAGCGCAAC ATCACGCTCG CGCGGATGGC GCAGCAGGGC
AACCTGTCGC AGGCGATGGT CGAGGTGCTG AAGATCGCGA GCGCGTGCCG GCTGAACATC
GTGATCTCGG GCGGCACGGG CTCCGGCAAG ACGACGCTGC TGAACGCGCT GTCGCACTTC
ATCGATTCGC ACGAGCGCAT CGTGACGATC GAGGACGCCG CGGAGCTGCA ATTGCAGCAG
CCGCACGTCG TGAGCCTCGA GACGCGCCCG GAGAACAGCG AGGGGCTGGG CGGCGTGTCG
CAGCGCGATC TCGTGCGCAA CGCGCTGCGC ATGCGCCCCG ATCGCATCAT CCTCGGCGAG
ACGCGCGGCC CGGAGGCGTT CGACGTGCTG CAGGCGATGA ACACCGGGCA CGACGGCTCG
ATGACGACGA TCCATGCGAA CACGCCGCGC GATGCGATCA CGCGCCTCGA GAGCATGGTG
ATGATGGCCA ACGGCAACCT GCCGCTCGTG TCGATCCGCC GGCAGATCGC GAGCGCGGTG
CACATGATCC TGCAGATCGA GCGCATGCGC GACGGCGTGC GGCGCGTCAC GCGCGTGACC
GAGATCGCCG GCATGGAGGG CGATGTCGTG ATCACGCAGG ATCTGTTCGC GTTCCGCTAC
GACGCGAGCG CGTTCCAGGA GCAGGTGCAC GGAATGTTCG AATCGTCGTC GCTGCGCCCG
GCGTTCGCGC AGCGCGCCGC GTATTACGGC CTCGAGGGCG CGCTGCTCGG CGCGTTGCAG
CCGTGA
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| Protein sequence | MFGRRPAASF APGDAGGAHE FAPDAAPAGA APAGGHASAP DASGAARARE PAGVSGASAP
GGAPQSGVAP SGHRPASRDD RIDRIDRDDG HDRAPAQDHH EALIRSETFK TIRAVVFSSM
NMSAALMMSR AEVREGIEQA AADVIARERL TVTLAEQALI VDEILNDMFG VGPIEPLLAD
ERVTDILVNG PDQVYVERAG KLELTPLKFR DNAHVINVAQ RIAAAVGRRV DESSPMVDAR
LADGSRVNVV LPPIAIRGAS ISIRKFAKRN ITLARMAQQG NLSQAMVEVL KIASACRLNI
VISGGTGSGK TTLLNALSHF IDSHERIVTI EDAAELQLQQ PHVVSLETRP ENSEGLGGVS
QRDLVRNALR MRPDRIILGE TRGPEAFDVL QAMNTGHDGS MTTIHANTPR DAITRLESMV
MMANGNLPLV SIRRQIASAV HMILQIERMR DGVRRVTRVT EIAGMEGDVV ITQDLFAFRY
DASAFQEQVH GMFESSSLRP AFAQRAAYYG LEGALLGALQ P
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