| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2012 |
|---|
| Symbol | lexA |
|---|
| ID | 3689439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 2179705 |
|---|
| End bp | 2180412 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637728468 |
|---|
| Product | LexA repressor |
|---|
| Protein accession | YP_333407 |
|---|
| Protein GI | 76809814 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATTTCC CGCGATACTG TATAAAAATA CAGCTCACTG TCTATCCATA CAGTCATGCC
ATGATCAAAC TCACCGCCCG CCAGCAGCAA GTGTTCGACT TGATTCGTCG CGCGATCGAG
CGCTCGGGCT TTCCTCCGAC GCGCGCGGAA ATCGCCGCCG AGCTGGGTTT CAGCTCGCCG
AATGCGGCCG AGGAGCACTT GCGGGCGCTC GCGCGCAAGG GCGTGATCGA ACTGGCGGCG
GGCGCGTCGC GCGGCATCCG CCTGCTCGGC ATCGACGACG CGCCGCATCA GCTGACGCTG
CCGCATGCAG CGCTGATGCA GCTGTCGCTG CCGCTCGTCG GCCGTGTCGC GGCGGGCAGT
CCGATCCTCG CGCAGGAGCA CATCTCGCAG CACTACGCGT GCGACCCCGC GCTCTTCTCG
AGCAAGCCGG ACTACCTGTT GAAGGTGCGC GGCCTGTCGA TGCGCGACGC CGGCATCCTC
GACGGCGACC TGCTCGCCGT GCAGAAGCGG ACCGAGGCGA AGGACGGCCA AATCATCGTC
GCCCGGCTCG GCGACGACGT CACGGTCAAG CGCCTGAAGC GCCGGCCGGG CGGCGTCGAG
CTGATCGCCG AGAACCCCGA TTACGAGAAC ATCTTCGTGA AGGCCGGCAG TGCGGAATTC
GCGCTCGAAG GCATCGCCGT CGGGCTGATC CGCCCGGGCG AGTTCTGA
|
|---|
| Protein sequence | MNFPRYCIKI QLTVYPYSHA MIKLTARQQQ VFDLIRRAIE RSGFPPTRAE IAAELGFSSP
NAAEEHLRAL ARKGVIELAA GASRGIRLLG IDDAPHQLTL PHAALMQLSL PLVGRVAAGS
PILAQEHISQ HYACDPALFS SKPDYLLKVR GLSMRDAGIL DGDLLAVQKR TEAKDGQIIV
ARLGDDVTVK RLKRRPGGVE LIAENPDYEN IFVKAGSAEF ALEGIAVGLI RPGEF
|
|---|
| |