Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1972 |
Symbol | |
ID | 3690185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 2148559 |
End bp | 2149416 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637728428 |
Product | N-acetylmuramoyl-L-alanine amidase domain-containing protein |
Protein accession | YP_333369 |
Protein GI | 76809231 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGCCG CCGCCTGTAC GACGCCCACG CTCGTCAATC GCGGCGATTA CTACGCCGAC ACGAGCCTTC CCGCGCGCAG CGTCGATTCG CGCATCCGCT TCCTCGTCAT GCACTACACC GAGATCGGCG AAGCGCCGTC GCTGCGCGTG TTGACGCAGG AGAACGTCAG CGCCCATTAC GTCGTGCCCG ACGCGCCGCG CACCGAGCGG GGCGCGCCCG TCGTCTATCA GCTCGTGCCG GAAAGCGAGC GCGCATGGCA CGCGGGCGTG AGCGCGTGGC AGGGCGCGAC CGAGCTGAAC GGCGTGTCGA TCGGCATCGA GAACGTCAAC CGCGGCCCGA TCGATACGCC GCACGGCCGC ATGTGGGCGC CGTATCCGCC CGCGCAGGTC GACGCGATCG TTCGGCTGGC GAAGGATATC GTCGCCCGCT ATCGGATTCC GCCGACGCGC GTCGTCGGCC ACAGCGACAT CGCGCCGCAG CGCAAGATCG ATCCGGGCCC GCTGTTTCCG TGGCGCGCGC TCGCGAAGGC GGGCGTCGGC GCGTGGCCGG ACGACGAGAC GGTGGCCGCG CGCCTCGCGG GCCGCCCGCC GAAGTCGCTC GTCGACGTGC GCGAGCTGCA GCTGAAGCTC GCGCGCTACG GTTACGACGT CGCGACGGAC GGCGTGCTCG ACGACCGCAC GCGGCGCGTG TTCTCCGCGT TCCAGATGCA TTTCCGGCCG ACCGATTACG CGGGCAACCC GGATGCGGAG ACCGACGCGA TCGCGCAGGC GCTGCTCGAC AAGTACATGC CGTCGCAGCC GGCGCCCGAG CGCGATGCGG CGGCGCTCGA CGCGGCGAGC GGCGTGGCCG CCCAATGA
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Protein sequence | MLAAACTTPT LVNRGDYYAD TSLPARSVDS RIRFLVMHYT EIGEAPSLRV LTQENVSAHY VVPDAPRTER GAPVVYQLVP ESERAWHAGV SAWQGATELN GVSIGIENVN RGPIDTPHGR MWAPYPPAQV DAIVRLAKDI VARYRIPPTR VVGHSDIAPQ RKIDPGPLFP WRALAKAGVG AWPDDETVAA RLAGRPPKSL VDVRELQLKL ARYGYDVATD GVLDDRTRRV FSAFQMHFRP TDYAGNPDAE TDAIAQALLD KYMPSQPAPE RDAAALDAAS GVAAQ
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