Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1940 |
Symbol | |
ID | 3688900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 2113730 |
End bp | 2114776 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637728396 |
Product | CpaB family Flp pilus assembly protein |
Protein accession | YP_333339 |
Protein GI | 76810330 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0235089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGTGCT GCCGACCACG CTCACGAGCC GCGCGACGGT GCAGATCAAC CCGACCAACA TCATATGAAG TACCCGAGCG ACTAGGCCGC AGCGGCGCGC CGCCGGTTTT CCCCAACGTC ATTCTCGCTG TTGCACTGAT AACAACCATG GCCAATCATC TGACCAAGAT CATCGCGGGG CTGCTGATCG GGATCGCGAT CCTGCTCGGC ATTTACGCAT GGCTGCTCGG GCGCAAGCCG GCGCCTGTCG CGCCGGGCGC CGCGCCCGCC GTGGCGACGG CGATGGTGCC CGTCGTCGTC GCGGCGCGCG CGCTGCCCGC CGGGCAGCCG ATTCCCGCCG ATGCGCTGAA GGTGCAGCAG ACGCCGACGC CGATCGCCGG CGCCTTCCCG AATCCGATGC TCGTGACGGG CCGCATCCCG GCGAGCGACA TCGGCGCGCA GGCGCCGGTG CTCGAGAGCG AGCTGATGTC GGGCCTCGCC GACCAGATCG CGCCCGGCGA GCGTGCCGTC GCGATCAAGG TCGACGATAC GAACGCGGTC GGCAACCGGC TGCGTCCCGG CAATTTCGTC GACGTGTTCG TGAACCTGAA GCGCGAAGGC GGCTTCGGTG CGACCGGCTC CGAGATCGCG CAGACCCAGG CGCGGCTGCT GCTGTCGCGG GTGCGCGTGC TGTCGTTCGG CGATGCGACG GTGGAGCGCG ACGGCACGCC GGGCCCGACG GGCGCGGGCG CGCGCACCGC GGTGCTCGCC GTGCCGACCG CGCAGGTCGA CGCGCTCACG CTCGCCGAGG CGAGCGGGCG GCTCGTGCTC GCGCTGCGCA GCCCGCGCGA CGAAGACATC GCCGCGCAGA CGGTGGCGAT CCGCGCGCCG GCCGGCGCCG GGCCGTCGAA TCAGGCGGCG ACGGGGCTCG TGCTGAGCGA ACTGTCGGGC AGCGGGGCTC CCGCGCAGGC GCCGCGCGCG GCTCCGACGC GAGTGACGGC CGCGCCGCAT GCGGCGGGCA GCATCGAAGT GATCCGGGGA GGGCGAGCCG AGACGCTCGC CTATTGA
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Protein sequence | MRCCRPRSRA ARRCRSTRPT SYEVPERLGR SGAPPVFPNV ILAVALITTM ANHLTKIIAG LLIGIAILLG IYAWLLGRKP APVAPGAAPA VATAMVPVVV AARALPAGQP IPADALKVQQ TPTPIAGAFP NPMLVTGRIP ASDIGAQAPV LESELMSGLA DQIAPGERAV AIKVDDTNAV GNRLRPGNFV DVFVNLKREG GFGATGSEIA QTQARLLLSR VRVLSFGDAT VERDGTPGPT GAGARTAVLA VPTAQVDALT LAEASGRLVL ALRSPRDEDI AAQTVAIRAP AGAGPSNQAA TGLVLSELSG SGAPAQAPRA APTRVTAAPH AAGSIEVIRG GRAETLAY
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