Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1921 |
Symbol | |
ID | 3691408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 2094048 |
End bp | 2095592 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637728377 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_333320 |
Protein GI | 76809752 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.330678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCATTA TCCACTCCGA ATCAGATGCC GAGCCAGGAA ACCCACCGAT GAAAACCCTC CCGTTGTCCG CTTGCCGGAC CGCCGTGGCC GTCGCGGTCG CCGCGCTCGC GCTCGCGGGA TGCGCGAACT ATTTCGGCCT CAAGAGCGAC AAGGCGATCG CTCCCGCGGC GCAGTTCGAA AGCGCGCGGA GCCTGCCCGC GCAGGGCGGC CAATGGCCGT CGCTCGACTG GGCGAACCAG TTCGGCGATC CGCAATTGCC GAAGCTGATC GACGAGGCGC TCGAAGGCAA TCCGACGATC GCGCAGGCGC AGGCGCGCAT CGCGAAGGCA TCGTCGTACA TCGAGTCGTC GCGCTCGACG CTGCTGCCGA AGGCCGACGC GAAGTACTCG TGGACCCGCG AGCTGTACTC GGGCAACGCC CTTTTCCCGC CCCCGTACGG CGGCCAGTGG TACAGCGAGA ACAACGCGCT CGCGAGCGCG TCGTGGGAGC TCGATCTGTG GGGCAAGAAC CGCGCGCGCC TGAATGCGGC CGTGTCGCAG GAAAAGGCCG CCGAAGCCGA CCTGCAGCAG GCGCGCGTGA CGCTCGCGAC GTCGGTCGCG CGCACGTACA ACCAGCTCGC GCAACTGTAC GCGCTGCGCG ACATCGCCGG GCGCGAGATC TCGAACCGGC AGACGGTCGG CAAGATCACC GACGGCCGCG TCGGCGCGGG CCTCGACACG AACGTCGAGC GCCAGACCGC GCGCGGCAAC ATCGCGACGA GCCAGTCGAC GCTGTCCGAT CTCGACGGCC AGATCACGAA CGTCCGCTAT CAGCTCGCCG CGCTGCTCGG CAAAGGTCCG GACCGCGGGC TGCAGATCGC CGCGCCCGTG CTGAGCGCGG GCGGCGCGGT CGCGCTGCCG GAGAACCTGC CCGCCGATCT CGTGTCGCGC CGCCCGGATC TCGTCGCCGC GCGCTGGCAG GTCGAAGCGG CGATGCACGA CGTGAAGGAA GCGAAAGCCG AGTTCTTTCC GGACATCAAC CTCGCGGCGG GCTTCGGCTT CGACGCGTTC GGCTGGGGCC GATTCCTGAA CTTCGCGAGC CGCCAGGCGC AGTTCGGCCC CGCGATCCAC CTGCCGATCT TCGACGGCGG CGCGCTGCGC GCGCAATTGA AGGGCCGCTA CGCGGACTTC GATCTGTCGG TCGCGAACTA CAACCAGACG CTCATCAACG CGCTGAACGA CGTCGCGACG CAAGTCGCGT CGATTCGCTC GGTCGACACG CAAATGGGCG ACGCGCAGCG CGCGCTCGAT GCGTCGACGC GCGCCTACGA GCTCGCGGTG ATCCGCTACA AGGCGGGCCT GTCGCCGCAG TTGCAGGTGC TCAACGCGGA CAGCAACCGG CTCGCCGCCG AGCAGACGGT GACGAACCTG AAGATGCGCC GCCGCGACCT GCAGATCGGC CTCGTGAAGG CGCTCGGCGG CGGCTTCGAC GCGGCCGGCA CACGGCTCGC CGCGCCCGCT CCCGCCTCGG CGCCGGCCGC GCCCGCGCAG CACGCATCGA ACTGA
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Protein sequence | MSIIHSESDA EPGNPPMKTL PLSACRTAVA VAVAALALAG CANYFGLKSD KAIAPAAQFE SARSLPAQGG QWPSLDWANQ FGDPQLPKLI DEALEGNPTI AQAQARIAKA SSYIESSRST LLPKADAKYS WTRELYSGNA LFPPPYGGQW YSENNALASA SWELDLWGKN RARLNAAVSQ EKAAEADLQQ ARVTLATSVA RTYNQLAQLY ALRDIAGREI SNRQTVGKIT DGRVGAGLDT NVERQTARGN IATSQSTLSD LDGQITNVRY QLAALLGKGP DRGLQIAAPV LSAGGAVALP ENLPADLVSR RPDLVAARWQ VEAAMHDVKE AKAEFFPDIN LAAGFGFDAF GWGRFLNFAS RQAQFGPAIH LPIFDGGALR AQLKGRYADF DLSVANYNQT LINALNDVAT QVASIRSVDT QMGDAQRALD ASTRAYELAV IRYKAGLSPQ LQVLNADSNR LAAEQTVTNL KMRRRDLQIG LVKALGGGFD AAGTRLAAPA PASAPAAPAQ HASN
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