| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1793 |
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| Symbol | |
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| ID | 3689091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 1952880 |
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| End bp | 1955312 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637728249 |
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| Product | putative fimbriae-related protein |
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| Protein accession | YP_333194 |
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| Protein GI | 76810616 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGAC GGGGAAATGC CTTGAAGCGG TACAACGATG ACAGAACGAG CGGACTGCCG
TGGCGGCGCG CGGCGGCGTG GGCGGTGGGC ATCGCATTCG CGGCGGCGGG GCACGCGCGC
GCGGGCGAGA CGGCGACGCT CGCGGACAGC TTCGGCCGCG CGCCGCCGCC CGTGGGGGGC
ACGGCGGCGC ACGGCACGCT GTATCTCGAG CTCGTCGTGA ACGCGCTGTC GACGGGGCGC
ATCGTGCCGG TTCGCTATCG CGACGGCGTC TACTATGCGC GCGCGGGCGA TCTCGCGCAG
GCGTCGGTGC GCACGGGCGC GCAGCCCGAT GCGCTCGTCG ATCTGTCGAG GCTCGACGGC
GTGCAGGTCG AATACGAGAG CGCCGAGCAG CGCCTGAAGC TCACCGTGCC GCCCGACTGG
CTGCCGCGCC AGACGCTCGG TTCGCCGCGG CTGTACGACC GCACGCCCGC GGCCGTCAGC
TTCGGGCTCC TGTTCAATTA CGACGTGTAT GCGAATTCGC CGACGCTCGG CACGAGCTAC
ACGTCCGCAT GGACCGAGCA GCGGCTGTTC GACCGGTGGG GCACCGTGAC GAACACGGGC
GTCTACCGGC GCGATTACGG TGGCGGCGCC GGCGGCGTCG GGAGCAACCG CTATCTGCGC
TACGACACGT TCTGGCGCTA TTCGGACCAG GACCGGCTGC GCACGTACAC CGCGGGCGAC
GTGATCACGG GCGCGCTGTC GTGGTCGAGC GCCGTGCGCT TGGGGGGCGT GTCCGTCGAG
CGCGATTTCA AGGTGCGGCC CGACATCGTC ACCTATCCGC TGCCGCAGTT CTCGGGCCAG
GCCGCGGTGC CCACCGCGGT CGATCTGTTC ATCAACGGCA GCAAGACGAC GACGGGGCAG
GTGAATCCCG GCCCGTTCAC GATGAACAAC GTGCCGTTCA TCAACGGCGC CGGCGAGGCG
ACCGTCGTCA CGACCGACGC GCTCGGCCGT CAGGTGGCGA CGACGATTCC GTTCTACGTC
GCGAACACGC TGCTGCAAAA AGGGCTCTCC GATTATTCGC TGTCGGCGGG CGCGATGCGG
CGCGACTACG GGATCCGCTC GTTCTCGTAC GGCAAGTTCG CGGCGTCGGG CACCGCGCGT
CACGGCCTGA CCGATTACCT GACGCTCGAG GGCCACGTGG AGGGCGGCGA GCGCTTCGCG
CTCGGCGGGC TCGGGTTCGA CCTCGGCATC GGCATGTTCG GCGTGCTCGG CGTCGCGGCG
ACGCAGAGCC GCCTCGCCGG TGCGTCGGGC CGGCAATACG CGTTCGGCTA CAGCTACGCG
TCGCAGCGGT TCAGCGTGTC GCTGCAGCGC ATCCAGCGCA CGAACGGGTT TCGCGACCTG
TCGGTGTACG ACCTGCCGGC GAACGTCGCG TACCGGCTCG TGCGCAGCAG CACGCAGGCG
ACGGGCGCGC TCAATCTCGG CGCGCTCGGC GGCACGCTCG GCGCTGGCTA CTTCGATGTG
CGCGGCGCGG ACGGCACGCG CACGCGGATC GCGAACCTGT CGTATACGCG GCCGCTATGG
CGGCGCGCGA CGCTCTACGC ATCGGTCAAC AAGACGGTCG GCGAGCACGG CGTGGCCGCG
CAACTTCAAC TGATCGTGCC GCTCGGCGAG CCGGGCGTCG TGACGGGCGC GCTCGCGCGC
GACGCGAACA ACAGTTTCAG CGAGCGCGTG CAGTACAGCC GCAGCGTGCC GAGCGACGGC
GGCCTCGGCT GGAATCTCGC GTACGCGGGC GGCGGCTCGC ATTATCAGCA GGCGGATGCG
ACGTGGCGCA ACCGCTACTT CCAGGCGCAG GGCGGCGTGT ACGGCTACGG CGCGGGGCGC
GGCTACGCGC GCTGGGGCGA GGTGCAGGGC TCGGTCGTCG TGATGGACGG CGCGGTGCTG
CCCGCGAACC GTGTCGACGA TGCGTTCGTG CTGATCGATA CGCAGGGCCG CGGGGGCGTG
CCGGTGCGCT ACGAGAATCA GCTCGTCGGC AAGACCGACG GCGGCGGCCA CCTGCTCGTG
CCGTGGGCGC CGTCGTATTA CGCGGGCAAG TACGAGATCG ATCCGCTCGA CCTGCCGAGC
AACGTGCGCG TGCCGATCGT CGAGCGCCGC GTCGCGGTGC GCGACCACGG CGGTGCGCTC
GTCACGTTCC CGATCCGCAG GATCGTCTGC GCGCAGATCG CGCTCGTCGA CGCGGCGGGC
CGGCCGGTCG CCATCGGCTC GCGCGTGCTG CACGAGGAGA GCGGCGAGAC CGCGCTCGTC
GGCTGGCAGG GCGAGACCTA TCTCGAAGGC TTGTCCGCGC TCAACCACCT GCGCGTGCGG
ACGCCCGACG GCCGCACCTG CCGCGCGACG TTCGCAGCCG ACGTCGACGC GGCGCAGATG
AGCCGCGTCG GCCCGCTCGC GTGCGGCGAA TAA
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| Protein sequence | MSRRGNALKR YNDDRTSGLP WRRAAAWAVG IAFAAAGHAR AGETATLADS FGRAPPPVGG
TAAHGTLYLE LVVNALSTGR IVPVRYRDGV YYARAGDLAQ ASVRTGAQPD ALVDLSRLDG
VQVEYESAEQ RLKLTVPPDW LPRQTLGSPR LYDRTPAAVS FGLLFNYDVY ANSPTLGTSY
TSAWTEQRLF DRWGTVTNTG VYRRDYGGGA GGVGSNRYLR YDTFWRYSDQ DRLRTYTAGD
VITGALSWSS AVRLGGVSVE RDFKVRPDIV TYPLPQFSGQ AAVPTAVDLF INGSKTTTGQ
VNPGPFTMNN VPFINGAGEA TVVTTDALGR QVATTIPFYV ANTLLQKGLS DYSLSAGAMR
RDYGIRSFSY GKFAASGTAR HGLTDYLTLE GHVEGGERFA LGGLGFDLGI GMFGVLGVAA
TQSRLAGASG RQYAFGYSYA SQRFSVSLQR IQRTNGFRDL SVYDLPANVA YRLVRSSTQA
TGALNLGALG GTLGAGYFDV RGADGTRTRI ANLSYTRPLW RRATLYASVN KTVGEHGVAA
QLQLIVPLGE PGVVTGALAR DANNSFSERV QYSRSVPSDG GLGWNLAYAG GGSHYQQADA
TWRNRYFQAQ GGVYGYGAGR GYARWGEVQG SVVVMDGAVL PANRVDDAFV LIDTQGRGGV
PVRYENQLVG KTDGGGHLLV PWAPSYYAGK YEIDPLDLPS NVRVPIVERR VAVRDHGGAL
VTFPIRRIVC AQIALVDAAG RPVAIGSRVL HEESGETALV GWQGETYLEG LSALNHLRVR
TPDGRTCRAT FAADVDAAQM SRVGPLACGE
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