Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1610 |
Symbol | carB |
ID | 3688487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1690482 |
End bp | 1693736 |
Gene Length | 3255 bp |
Protein Length | 1084 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637728066 |
Product | carbamoyl phosphate synthase large subunit |
Protein accession | YP_333014 |
Protein GI | 76812013 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAAAC GCACAGACAT CAATAGCATC CTCATCATCG GCGCCGGCCC GATCATCATC GGCCAGGCGT GCGAGTTCGA CTACTCGGGC GCGCAGGCAT GCAAGGCGTT GCGTGAGGAG GGCTACAAGG TCATCCTCGT CAACAGCAAC CCGGCGACGA TCATGACCGA TCCGAACACG GCGGACGTCA CGTACATCGA GCCGATCACG TGGGAAGTCG TCGAGCGCAT CATCGCGAAG GAGCGCCCCG ACGCGATCCT GCCGACGATG GGCGGCCAAA CCGCGCTGAA CTGCGCGCTC GACCTGTTCC ACCACGGCGT GCTCGAGAAG TACGGCGTCG AGCTGATCGG CGCGTCGCCG GAGGCGATCG ACAAGGCCGA AGACCGCCAG AAGTTCAAGG ACGCGATGAC GAAGATCGGC CTCGGCTCGG CGAAGTCCGG CATCGCGCAC TCGATGGAAG AGGCGCTGAA GGTGCACGCG GACATCGCGG CGGCGACGGG CGGCAGCGGC TACCCGGTCG TGATCCGCCC GTCGTTCACG CTCGGCGGCT CGGGCGGCGG CATCGCGTAC AACCGCGAGG AGTTCGAGGA GATCTGCAAG CGCGGCCTCG ATCTGTCGCC GACGCGCGAG CTGCTGATCG AGGAATCGCT GCTCGGCTGG AAGGAGTACG AGATGGAGGT CGTGCGCGAT CGCGCCGACA ACTGCATCAT CGTCTGCTCG ATCGAGAACC TCGACCCGAT GGGCGTGCAC ACCGGCGATT CGATCACCGT CGCGCCCGCG CAGACGCTCA CCGACAAGGA ATACCAGATC CTGCGCAACG CGTCGCTCGC GGTGCTGCGC GAGATCGGCG TCGACACGGG CGGCTCGAAC GTGCAGTTCT CGATCAACCC GAAGGACGGC CGCATGGTCG TCATCGAAAT GAACCCGCGC GTGTCGCGCT CGTCGGCGCT CGCGTCGAAG GCGACCGGCT TTCCGATCGC GAAGGTCGCG GCGAAGCTCG CCGTCGGCTA CACGCTCGAC GAGCTGAAGA ACGAGATCAC GGGCGGCGCG ACGCCGGCGT CGTTCGAGCC GACGATCGAC TACGTCGTCA CGAAGATTCC GCGCTTCGCG TTCGAGAAGT TCCGCGAGGC CGATTCGCGT CTCACGACGC AGATGAAATC GGTCGGCGAA GTGATGGCGA TCGGCCGCAC GTTCCAGGAA TCGTTCCAGA AGGCGCTGCG CGGCCTCGAA GTCGGCGTCG ACGGCCTCGA CGAGAAGACG ACGAGCCGCG ACGAGATCAT CCGCGAGATC GGCGAGCCGG GCCCGGACCG GATCTGGTAT GTGGGCGACG CGTTTCGCGT GGGCATGTCG CGCGAGCAGA TCTTCGAGGA GACCGCGATC GATCCGTGGT TCCTTGCGCA GATCGAGCAG ATCGTGCTGA AGGAGAAGGC GCTCGCCGGC CGCACGCTCG CGAGCCTGAC GAAGGACGAG CTGCACTATC TGAAGCAAAG CGGCTTCTCC GACCGGCGCC TGGCGAAGCT GCTCGGCGCG ACGCCCGCCG ACGTGCGCGC GCGCCGCCTC GAGCTGAACG TGCGCCCGGT CTACAAGCGC GTCGACACTT GCGCGGCCGA GTTCGCGACG AAAACCGCCT ACATGTACTC GACCTACGAG GAGGAGTGCG AGGCGCAGCC GACCGGCAAC AGGAAGATCA TGGTGCTGGG CGGCGGCCCG AACCGGATCG GCCAGGGCAT CGAGTTCGAC TACTGCTGCG TGCACGCGGC GCTCGCGATG CGCGAGGACG GTTACGAAAC GATCATGGTC AACTGCAACC CGGAGACGGT GTCGACCGAC TACGACACGT CCGATCGTCT GTATTTCGAG CCGCTCACGC TCGAGGACGT GCTCGAGATC GTCGACAAGG AAAAGCCCGT CGGCGTGATC GTCCAGTACG GCGGCCAGAC GCCGCTGAAG CTCGCGCTCG ATCTGGAGGC GCACGGCGTG CCGATCATCG GCACGTCGCC GGACATGATC GACGCGGCCG AAGATCGCGA GCGCTTCCAG AAGCTGTTGC AGGACCTCGG CCTGCGCCAG CCGCCGAACC GCACCGCGCG CGCCGAGGAC GAAGCGCTCG CGCTCGCCGA CGAGATCGGC TATCCGCTCG TCGTGCGTCC GTCGTACGTG CTCGGCGGCC GCGCGATGGA GATCGTCCAC GAGCCGCGCG ACCTCGAGCG CTACATGCGC GAGGCGGTGA AGGTGTCGAA CGATTCGCCG GTGCTGCTCG ACCGCTTCCT GAACGACGCG ATCGAGTGCG ACGTCGATTG CATCTGCGAC GGCGACGCCG TGTTCATCGG CGGCGTGATG GAGCACATCG AGCAGGCGGG GGTCCACTCG GGCGATTCGG CGTGCTCGCT GCCGCCGTAC TCGCTGTCGA CGCAGACGGT CGCCGAGCTC AAGCGCCAGA CGGGCGCGAT GGCGAAGGCG CTGAACGTGG TCGGCCTGAT GAACGTGCAG TTCGCGATCC AGCAGGTGCC GCGGCCGGAC GGCTCGAAGG AAGACATCAT CTACGTGCTC GAGGTGAACC CGCGCGCGTC GCGCACGGTG CCGTACGTGT CGAAGGCGAC GAGCCTGCCG CTCGCGAAGA TCGCCGCGCG CGCGATGGTC GGCCAGAAGC TCGCGCAGCA GGGCGTGACG AAGGAAGTCG AGCCGCCGTA CTTCAGCGTG AAGGAAGCGG TGTTCCCGTT CATCAAGTTC CCGACCGTCG ATCCGGTGCT CGGGCCCGAG ATGCGTTCGA CGGGCGAGGT GATGGGCGTC GGCGCGACGT TCGGCGAGGC GCTCTTCAAG TCGCAGCTCG CGGCGGGTTC GCGCCTGCCG GAGTCGGGCA CGGTGCTGCT CACGGTGATG GACGCGGACA AGCCGAAGGC GGTCGAGGTC GCGAAGATGC TGCACGATCT CGGCTATCCG CTCGTCGCGA CGCGCGGCAC CGCCGCCGCG ATCGAGGCGG CCGGCGTGCC GGTGAAGGTC GTGAACAAGG TGAAGGACGG CCGTCCGCAC ATCGTCGACA TGATCAAGAA CGGCGAGATC GCGCTCGTGT TCACGACGGT CGACGAGACG CGCGCGGCGA TCGCCGATTC GCGCTCGATC CGGATGAGCG CGCAGGCGCA CAAGGTCACC TATTACACGA CGATGTCGGG CGCGCGCGCG GCGGTGGAGG GGCTGCGCTA CCTGAAGGAC TTGGAAGTCT ATGATTTACA AGGTCTGCAC GCTCGCCTAA ACTAA
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Protein sequence | MPKRTDINSI LIIGAGPIII GQACEFDYSG AQACKALREE GYKVILVNSN PATIMTDPNT ADVTYIEPIT WEVVERIIAK ERPDAILPTM GGQTALNCAL DLFHHGVLEK YGVELIGASP EAIDKAEDRQ KFKDAMTKIG LGSAKSGIAH SMEEALKVHA DIAAATGGSG YPVVIRPSFT LGGSGGGIAY NREEFEEICK RGLDLSPTRE LLIEESLLGW KEYEMEVVRD RADNCIIVCS IENLDPMGVH TGDSITVAPA QTLTDKEYQI LRNASLAVLR EIGVDTGGSN VQFSINPKDG RMVVIEMNPR VSRSSALASK ATGFPIAKVA AKLAVGYTLD ELKNEITGGA TPASFEPTID YVVTKIPRFA FEKFREADSR LTTQMKSVGE VMAIGRTFQE SFQKALRGLE VGVDGLDEKT TSRDEIIREI GEPGPDRIWY VGDAFRVGMS REQIFEETAI DPWFLAQIEQ IVLKEKALAG RTLASLTKDE LHYLKQSGFS DRRLAKLLGA TPADVRARRL ELNVRPVYKR VDTCAAEFAT KTAYMYSTYE EECEAQPTGN RKIMVLGGGP NRIGQGIEFD YCCVHAALAM REDGYETIMV NCNPETVSTD YDTSDRLYFE PLTLEDVLEI VDKEKPVGVI VQYGGQTPLK LALDLEAHGV PIIGTSPDMI DAAEDRERFQ KLLQDLGLRQ PPNRTARAED EALALADEIG YPLVVRPSYV LGGRAMEIVH EPRDLERYMR EAVKVSNDSP VLLDRFLNDA IECDVDCICD GDAVFIGGVM EHIEQAGVHS GDSACSLPPY SLSTQTVAEL KRQTGAMAKA LNVVGLMNVQ FAIQQVPRPD GSKEDIIYVL EVNPRASRTV PYVSKATSLP LAKIAARAMV GQKLAQQGVT KEVEPPYFSV KEAVFPFIKF PTVDPVLGPE MRSTGEVMGV GATFGEALFK SQLAAGSRLP ESGTVLLTVM DADKPKAVEV AKMLHDLGYP LVATRGTAAA IEAAGVPVKV VNKVKDGRPH IVDMIKNGEI ALVFTTVDET RAAIADSRSI RMSAQAHKVT YYTTMSGARA AVEGLRYLKD LEVYDLQGLH ARLN
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