Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1363 |
Symbol | rfaQ |
ID | 3688628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1434344 |
End bp | 1435528 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637727819 |
Product | lipopolysaccharide core biosynthesis heptosyltransferase |
Protein accession | YP_332773 |
Protein GI | 76810693 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02201] lipopolysaccharide heptosyltransferase III, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.824879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGCTC CGTTGACGCT TTCCAGGCCG CCGCGCACCA TTCTCGTATC CTGCACGCGT CGCCTTGGCG ACGTGCTGCT GACGACGCCG CTCGTCCGGT CACTGAAGGC GCGCTGGCCC GACGCGCAGA TCGACATGAT CGTGTTTCGC GGCACTGAAG GCGTGCTCGA GCACAATCCC GACATCCGCC GCGTGATCAC GGTCGCGCCG CGCGCTCGGC CGAAGGAGCG CATCGCCGAT GCGCTGCGCA TCTGGCGCAA GTACGATCTC GCGTGTGCGG CGATCAGTTC CGATCGCGCG CGCTTCTATG CGTTCTTCGC GGGGCGCAGG CGGATCGGGC TCGTCGATCC CGGGCGGCTC ACGCGGCTCA CGCGTTTCAT CCTGAACGGC ATCGTGCTCG ACGAGCATCG CGATGTCCAT ACCGTCACGA GCAACCTGTC GCTGGCCGAC GCGCTCGATG TACCGCGATG CGCCGACGTC GTCGCGCCCG GCATCGGCGA CGATCCCGCC GCCCGCGCTC GCTTCGACGC GAAGCTGTAT GGAACGCCCG CGCTGTCACG CGGCGAGCCG TACATCGTGC TGCATCCGTA TCCGATGTTC CGCTACAAGC AGTGGCATGA GGACGGCTGG GTCGATCTCG TGCGCTGGGC ACGCAGCAGC GGGTTCGCGG TCGCGCTGAG CGGCGGTCCC GCGCAGGCCG AGCGCGACTA TGCCGCGCGT ATCGCGCGAG CGGCCGGCGA ACCCGTGTTG AACATGACGG GGGAACTGTC GTTCGGCGAG AGCGCCGAGA TGTTTCGGCG CGCGCGGCTC TTCATCGGTC CGGACACCGG CGCGACGCAT GTTGCCGCCG CCTGCGGCGT TCCGACGATC GCGCTCTTCG GGCCGTCGAA TCCGACGCGC TGGGGCCCGT GGCCCGCGCA TTGGCCGGCC GGCGACGAGC CGTGGCCCCT GCGCGGTTCG GGGCGGCGCG GCAATGTCTA TCTGCTGCAG GGCGAAGGCG ATTGCGTGCC GTGCAAGCTC GAAGGCTGCG ATCGGCATCT GGACAGCTGG AGCCGATGCC TGAGCGAACT GCCGTCGGCG CGTGTGATCG GCGTGGCTGC GGCGATGCTC GGATTCGATG CGGCTAACGC GCCGGCTGAC GTCGCGACGC CGGTCGATGT CAGCCGGCTC GCGGCGCGCA AGTAG
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Protein sequence | MTAPLTLSRP PRTILVSCTR RLGDVLLTTP LVRSLKARWP DAQIDMIVFR GTEGVLEHNP DIRRVITVAP RARPKERIAD ALRIWRKYDL ACAAISSDRA RFYAFFAGRR RIGLVDPGRL TRLTRFILNG IVLDEHRDVH TVTSNLSLAD ALDVPRCADV VAPGIGDDPA ARARFDAKLY GTPALSRGEP YIVLHPYPMF RYKQWHEDGW VDLVRWARSS GFAVALSGGP AQAERDYAAR IARAAGEPVL NMTGELSFGE SAEMFRRARL FIGPDTGATH VAAACGVPTI ALFGPSNPTR WGPWPAHWPA GDEPWPLRGS GRRGNVYLLQ GEGDCVPCKL EGCDRHLDSW SRCLSELPSA RVIGVAAAML GFDAANAPAD VATPVDVSRL AARK
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