Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1214 |
Symbol | sodC |
ID | 3688266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1261837 |
End bp | 1262376 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637727670 |
Product | superoxide dismutase, Cu-Zn |
Protein accession | YP_332625 |
Protein GI | 76808890 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2032] Cu/Zn superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGAC GACTCGACGG CGTGCCGGGG TGGCTCGCGC TCAATGCGCC GCTTGTCCTG GCCGCCATCG GCCTGTTGGC CGGCTGCACC ACCTTTGCCT CGCAACACGA AAAACGCGCC GACGCGCTGC TGCAGCCGAC CGTCGGCAGC CAGGCGCGCG GCACGGTGAC GCTCGCCGAA CGCCCGGACG GCGTGCAGGT CACGTACAAC TTCGCGGGCC TGCCGCCCAA CAGCGACCAC GCGTTGCAGG TTCACGAGCG CGGCGATTGC AACGCCGCCG ACGGCTCGAG CGCGGGCGCG GTATTCGCGC CCGCGGCCGA CCGGCTGCGC GCGGGCGCGC GCGTCGGCGG CGACCTCGGC AACATCCACG CGGATGCGAA CGGCGTCGCG GCGGGTTTCA TCACCGCGCC GGACCTCGCG CTCGACGGCG TGCGCTCGGT GCTCGGCCGC TCGGTGCTCG TCCATCGCGA TCCGGCAGAC CCGGCGTTCC CGCAGCACGG CGCGGGGCCC GCGCTTGCGT GCGGCGTCGT GCGGCAATGA
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Protein sequence | MKRRLDGVPG WLALNAPLVL AAIGLLAGCT TFASQHEKRA DALLQPTVGS QARGTVTLAE RPDGVQVTYN FAGLPPNSDH ALQVHERGDC NAADGSSAGA VFAPAADRLR AGARVGGDLG NIHADANGVA AGFITAPDLA LDGVRSVLGR SVLVHRDPAD PAFPQHGAGP ALACGVVRQ
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