Gene BURPS1710b_1085 details

Gene Information

• Locus tag: BURPS1710b_1085
• Symbol: sodB
• ID: 3688481
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: +
• Start bp: 1139442
• End bp: 1140107
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637727541
• Product: superoxide dismutase
• Protein accession: YP_332497
• Protein GI: 76810291
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0605] Superoxide dismutase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00846047
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCGGGGTT ATTCGGACTC GCCTACAATC GGGCGTTCCG CGGCATCCAA CACTGCCCTC 
CCTACATACA CTTCGAAGGA ACCGATCATG GCTCATACGC TCCCGCCGCT GCCGTACGCT 
GAAGACGCCC TCGCTCCGCA TATCTCGCAG GAGACGATCC AGTTTCACTA CGGCAAGCAT 
CACCAGGCTT ATGTGACGAA CCTGAACAAC CTGATCCCCG GCTCCGAGTT CGAGAACCTG 
CCGCTGGAAG AGATCGTGAA GAAGTCGTCG GGCGGCATCT TCAACAACGC CGCGCAGATC 
TGGAATCACA CGTTCTTCTG GAACAGCCTG TCGCCGAACG GCGGCGGCGC GCCGACGGGC 
GCGCTCGGCG ACGCGATCAA CGCGAAGTGG GGTTCGTTCG ACGCGTTCAA GGAGGCGTTC 
ACGAAGGCAG CGGTCGGCAC GTTCGGCTCG GGCTGGGCTT GGCTCGTGAA GAAGGCGGAC 
GGCTCGCTCG ACATCGTGTC GACGAGCAAT GCGGCCACGC CGCTCACGAC GGCCGACAAG 
CCGCTCGTCA CGATCGACGT GTGGGAACAC GCTTACTACA TCGATTACCG CAACGCGCGC 
CCGAAGTTCG TCGAAGCGTT CTGGAACATC GTGAACTGGG ACTTCGCCGC GAAGAACTTC 
GCGTAA 

 

Protein sequence

MRGYSDSPTI GRSAASNTAL PTYTSKEPIM AHTLPPLPYA EDALAPHISQ ETIQFHYGKH 
HQAYVTNLNN LIPGSEFENL PLEEIVKKSS GGIFNNAAQI WNHTFFWNSL SPNGGGAPTG 
ALGDAINAKW GSFDAFKEAF TKAAVGTFGS GWAWLVKKAD GSLDIVSTSN AATPLTTADK 
PLVTIDVWEH AYYIDYRNAR PKFVEAFWNI VNWDFAAKNF A