| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1030 |
|---|
| Symbol | np20 |
|---|
| ID | 3689180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 1078167 |
|---|
| End bp | 1078967 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637727486 |
|---|
| Product | transcriptional regulator np20 |
|---|
| Protein accession | YP_332442 |
|---|
| Protein GI | 76811271 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.468809 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCGCGCC CGTCAGGATC GCGACCTTCT CCTGCAGTCT CACTGGTGTC TCCGATTCGT
TATATGTCGT GCCGCCGGCC GCCGAAGCGA GCGTTCGCTC GCTTGCCGAT CATTTGCTCT
ATTTTCGAAC GAATGATCGA CCACGAAGCC GGCACTGTCA AGCCGGGAAA TCGGGGTTTC
GATGATGCGC CGCCGCATCG CGACGGCGGT CGACCCGGGC GGAACAAGGG TGACGGGCGG
GTGAGGACGG AGGACAGGCC GCAGGGCGGG GCGGGGATGC GGCGGGCGCG GATACGTTAT
ATCATCACGC TATCTCCCCG CCGACCGGTT CGCACGATGG CCTCGACCCA TTCCCTCGCC
GCCCGCCTTT CCCGCGCCGA TGCGTTCGCC GCCGAGCACG GCCTCGCCTG GACGCCGCTG
CGCCGTCAGG TCTACGAGCG CGTGCTCGCC GCCGGCCGGC CGATCGGCGC CTACGATCTG
CTCACCGAGC TCGAGCCGCA ACGCGGCCGC GTGCCGCCGA CCACCGTCTA CCGCGCGCTC
GAGTTTCTGG TCGAGCACGG CTTCATCCAC CGGATCGAAT CGAAGAACGC GTTCATCGCG
TGCTGCGAGA TCGGCAAGCC GCACGAAGGA CAATTCCTGA TCTGCGAGGC ATGCGGCGAC
ACCGTCGAGA TTCCCGGCGG CGATCTGGCG AAGCAGTTGT CGTCGAGCCC GCCCGCGCAC
GGCTTCGAGG TGCACCGGCA GGTCGTCGAG CTGACCGGTC TGTGCGGGCA ATGCAAGACG
AAGCACGCGC ACCACGGCTG A
|
|---|
| Protein sequence | MPRPSGSRPS PAVSLVSPIR YMSCRRPPKR AFARLPIICS IFERMIDHEA GTVKPGNRGF
DDAPPHRDGG RPGRNKGDGR VRTEDRPQGG AGMRRARIRY IITLSPRRPV RTMASTHSLA
ARLSRADAFA AEHGLAWTPL RRQVYERVLA AGRPIGAYDL LTELEPQRGR VPPTTVYRAL
EFLVEHGFIH RIESKNAFIA CCEIGKPHEG QFLICEACGD TVEIPGGDLA KQLSSSPPAH
GFEVHRQVVE LTGLCGQCKT KHAHHG
|
|---|
| |