| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1009 |
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| Symbol | dacB |
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| ID | 3691600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 1053041 |
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| End bp | 1055443 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637727465 |
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| Product | peptidase |
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| Protein accession | YP_332421 |
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| Protein GI | 76811340 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAATC GACCTCACGC GCTACGCTTC CTTCACGACC ATGTAGCCGA GGCCGCGGAC
GTTGCGGATC AGGTCCGAGC CGAGCTTCTT GCGCAGCGCG TGGATATAGA CCTCGACGGT
GTTGCTGCCG ATCTCCTCGC CCCAGCCGTA CATCTTCTCC TCGAGCTGGC TCTTCGACAG
CACCGCGCCC GGACGCGCGA GCAGCGCTTC GAGCAGCGCG AACTCGCGCG CCGACAGCGC
GACGGGCGCC CCGTCGAGCG TCACCTGATG CGACGCCGGA TCGAGCGTCA GCGCGCCGTG
CCGGATCATC GATTCGCTGC GCCCCGACTG GCGGCGGATC AGCGCGCGCA TCCGCGCGGC
GAGCTCGTCG AGATCGAACG GCTTGACGAG ATAGTCGTCG GCGCCCGCGT CGAGGCCCTT
CACGCGATCG GCGACCGCAT CGCGCGCGGT GAGGATCAGC ACCGGCAGCG CGAGCCCGCG
CGCGCGCAGC GTGCGCAGCA CGTCGATGCC GTCGCGCTTG GGCAGCCCGA GATCGAGCAG
CAGCAGATCG TACGCCTCGC CGCCGAGCGC GGTGAGCGCC GCGTCGCCGT CCTGCACCCA
GTCGACCGCG CAGCCGTCGG CCTTCAGCGC CTTGCGCACG CCTTCGGCGA TCATCCGATC
GTCTTCAACC AGCAATATCC GCATCCTGAA AAACGTCCGT CGCATGCGTT CGAGATGGCG
GACATTGTAG CGCCGCCGCG CGCGGGAACG GACCTTCGGG CGATTTCGGC GCTGCTCGCG
CGCCGTTTTC TCTACAATGT GCGGCTTGCG CCACGCGCGC GCCCGTTGCT CACGTCGCCT
TCCGTTCTCC CGCATTCGTC GATGAATCAC CACGCCTGCC GCATCGCCGC CTCGCCAAGT
CCGCCCCCGC CCGCCGCCGT CCGTGCGCGG CGCACGCTCG CGCGCGGCGC GATGCTCGTC
GCCGCGTGCG CCGCGCTCGC GTTCGCCGCG CCCGCCGACG CCCGCAGGAA ACCGAAGCCC
CCCCGCTATC CGGCCGCGGT GTCGGCCGCG CGCAACGTGC TGCCCGCCTC GGTGCTCGTC
GCGCTGCAGC GCGCGCGCGT GCCGGCGTCG AGCCTGAGCG TCGTCGTCGA GCGGATCGGC
GATCGCACGC CCGCCGTCGC ATGGAACGCG AGCCGGCCGA TGCAGCCCGC CTCGACGATG
AAACTCGTGA CCACCTACGC GGGGCTGTCG CTGCTCGGCG CCGATTATCG CTGGCGTACG
AGCGCGTACG CCGACGGCGA CGTCGACGAG AACGGCACGC TGCACGGCAC GCTGTACATC
AAGGGCACCG GAGACCCGAA GCTCGTGCCG GAGGAACTGA TCGACCTCGT CAACAAGATC
CGCCGCGCGG GAATCGTCAA CGTCGACGGC GCGCTCGTGC TCGACAAGAC CTTCTTCGCG
CCGCAGACGC GCGACCTGCC GCCGCTCGAC GACGACGCGA GCGCCCCGTA CAACGTCGGC
CCCGACCCGC TGCTCTACGC GTTCAAGGCG CTGTCGTTCA CGGTGACGCC GACCGACAGC
GGCGCGATCG CAGTCGACGT CGTGCCGGCG CTCGCGAACC TGAACGTCGA CAACCGGCTC
GTCGAGGGAC AGGGCTCGTG CGACGCGGCG CGCCCGACGC TCGTGACCGA TGCGAACGGC
GAGCTCACCG CGTCGTTCGC GGGCGACTAT CCGCCGAGCT GCGGCCCGAC GACGACCAAT
CTCGCGGTGC TGAACCATTC CACGTTCTTC GCGCGCGGCT TTCTCGCGCT GTGGCGGCAG
ACGGGCGGCT CGTTCTCGGG GACGATCGCC GAGGGCAAGG TGCCGGGCCG TGCGCGGCCC
GTTGCGTCGC ACCACGGCCC GGTGCTGTCG AGCGTCGTGC ACGACATCAA CAAGTTCAGC
AACAACGTGA TGGCGCGCAA CCTGTTCCTC ACGATCGGCG CGGTCGAGCA CCGGCCGCCC
GCGACGCCCG CGCAGTCGGC CGACACGATC CGCGCGTTCC TCGCGCACAG CGGGCTGCCC
ACCGACGGGC TCGCGCTCGA GAACGGCTCG GGGCTGTCGC GCGACGAGCG CGTGAGCGCG
CTCGGGCTCG CCGACATGCT GCAGGCGGCC AACGCGAGCC CCGTCGCGCA GGCGTTCGTC
GATTCGCTGC CGATCGCGGG TGTCGACGGC ACGATGCGGA ACCGGCTGAC GAACGCACCC
GTCGGCGGCA ACGCGCACAT CAAGACGGGC ACGCTGCGCG ACGTGCGCGC GATCGCGGGC
TACGTCGCAT CGGCGGACGG CTCGAGCTAT GTCGTCGTCA GCTTCATCAA CGACGATCGC
GCGTCGGCCG CGCGCGCGGC GCACGACGCG CTGCTCGAAT GGGTGTACGA AGGGCCACGC
TGA
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| Protein sequence | MANRPHALRF LHDHVAEAAD VADQVRAELL AQRVDIDLDG VAADLLAPAV HLLLELALRQ
HRARTREQRF EQRELARRQR DGRPVERHLM RRRIERQRAV PDHRFAAPRL AADQRAHPRG
ELVEIERLDE IVVGARVEAL HAIGDRIARG EDQHRQREPA RAQRAQHVDA VALGQPEIEQ
QQIVRLAAER GERRVAVLHP VDRAAVGLQR LAHAFGDHPI VFNQQYPHPE KRPSHAFEMA
DIVAPPRAGT DLRAISALLA RRFLYNVRLA PRARPLLTSP SVLPHSSMNH HACRIAASPS
PPPPAAVRAR RTLARGAMLV AACAALAFAA PADARRKPKP PRYPAAVSAA RNVLPASVLV
ALQRARVPAS SLSVVVERIG DRTPAVAWNA SRPMQPASTM KLVTTYAGLS LLGADYRWRT
SAYADGDVDE NGTLHGTLYI KGTGDPKLVP EELIDLVNKI RRAGIVNVDG ALVLDKTFFA
PQTRDLPPLD DDASAPYNVG PDPLLYAFKA LSFTVTPTDS GAIAVDVVPA LANLNVDNRL
VEGQGSCDAA RPTLVTDANG ELTASFAGDY PPSCGPTTTN LAVLNHSTFF ARGFLALWRQ
TGGSFSGTIA EGKVPGRARP VASHHGPVLS SVVHDINKFS NNVMARNLFL TIGAVEHRPP
ATPAQSADTI RAFLAHSGLP TDGLALENGS GLSRDERVSA LGLADMLQAA NASPVAQAFV
DSLPIAGVDG TMRNRLTNAP VGGNAHIKTG TLRDVRAIAG YVASADGSSY VVVSFINDDR
ASAARAAHDA LLEWVYEGPR
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