Gene BURPS1710b_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_1003 
Symbol 
ID3691633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp1049122 
End bp1050150 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content74% 
IMG OID637727459 
ProductSua5/YciO/YrdC/YwlC family protein, putative 
Protein accessionYP_332415 
Protein GI76808623 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTCGA ACGATCGACC CTTCCCGAGC GCCGAGGCCA TCGAGGACGC GGCCGCGCGG 
CTCGATGCGG GCGAGCTCGT CGCGTTTCCG ACCGAGACCG TCTACGGGCT CGGCGCCGAC
GCGCAGAACC CGGCCGCCGT CGCGCGCATC TACGCGGCGA AAGGGCGGCC GGCGAACCAT
CCGGTGATCG TCCATCTCGC GCCGGGCAGC GATCCCGGTT ATTGGGTCGA AGCGTTGCCC
GCCGACGCGA AGAAGCTGAT CGACGCGTTC TGGCCCGGCC CGCTCACGCT GATCCTGAAG
CGCGCCACGC ACATTCCGGA CGCGGTGAGC GGCGGGCAGG ACTCGGTCGG CTTGCGCTGT
CCGTCGCATC CGGTCGCGCA GGCGCTGCTG CGCGCGTTCG ACGCGCGGCG CGGCGGGCAC
GGCGGCGTCG CCGCGCCGTC GGCGAACCGC TTCGGCCACG TGAGCCCGAC CACCGCGCAG
CACGTGCGCG ACGAGTTCGG CGATGCCGTC CATGTGCTCG ATGGCGGCCC GTCCGACGTC
GGCATCGAAT CGACGATTCT CGATTTGTCG CGCGGCTTTC CGGCGCTGCT GCGCCCGGGC
CATGTGAGCC CGCGGCAGAT CGCCGACGTG CTTGGCGTCG CGCCGCGCCT GCCCGACGGC
AGCGACGCAA CCGCGCCGCG CGCGTCCGGC ACGCTCAAGG CGCATTACGC GCCGCGCACG
CCGCTTGCGC TCGCGGCGTT CGAGCGGCTC GAGCCGCTGC TCGCGGCCGC GCGCGACACG
GGCGAACCGG TGGCGCTCGT CGCGCGCGCG TCGCGCGCCG GCGCGTGGGC GCATGCGGCG
GGCGTGCATT TCGTCGCGGC GCCCGAGGAT CCGGCGGCGT ACGCGCGCGA GCTCTACGGG
TTGCTGCGCG CGCTCGATCG TGCGCAGGTC GCGCGCATTC TCGTCGAGAA GCTGCCCGAT
ACGGCCGAAT GGACGGCGGT AAACGACCGG CTCGGCCGCG CGGCGGCGGC GTTCGACGCG
CAGGCGTGA
 
Protein sequence
MSSNDRPFPS AEAIEDAAAR LDAGELVAFP TETVYGLGAD AQNPAAVARI YAAKGRPANH 
PVIVHLAPGS DPGYWVEALP ADAKKLIDAF WPGPLTLILK RATHIPDAVS GGQDSVGLRC
PSHPVAQALL RAFDARRGGH GGVAAPSANR FGHVSPTTAQ HVRDEFGDAV HVLDGGPSDV
GIESTILDLS RGFPALLRPG HVSPRQIADV LGVAPRLPDG SDATAPRASG TLKAHYAPRT
PLALAAFERL EPLLAAARDT GEPVALVARA SRAGAWAHAA GVHFVAAPED PAAYARELYG
LLRALDRAQV ARILVEKLPD TAEWTAVNDR LGRAAAAFDA QA