| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0990 |
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| Symbol | rfaF |
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| ID | 3689441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 1037979 |
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| End bp | 1039019 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637727446 |
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| Product | lipopolysaccharide heptosyltransferase II |
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| Protein accession | YP_332402 |
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| Protein GI | 76809816 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.916286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCGCG CGTTGGTTAT CGCACCGAAC TGGATCGGTG ACGCATTGAT GGCGCAGCCG
CTTTTCGCGC TGCTGAAGAA ACTGCATCCC CGCATCGTCA TCGATGCCGT GGCGCCCGCG
TGGGTCGCGC CCGTGCTCGA GCGGATGCCC GAAATCCACG ATGTCCACGC GACCGAGCTC
GCGCACGGCA AGCTGCAGAT GCTGCACCGC TGGCAGCTCG CGAGCGACTT GCGCGAGCTC
GGTTACGACG CCGCGTATGT GCTGCCGAAT TCGCTGAAAT CGGCGCTGAT TCCGTGGCTC
GCCGGCATCC CGCTTCGGAT CGGCTACACG GGCGAGCATC GCTACGCGCT CCTGAACGTG
CGGCATGCGA ATCCGGGCAA GGCGCGCGAG ACGCGCGCGC CGATGGCACA ACATTACGCG
GCGCTTGCAT ACGCGCCCGG CGCGAAGCTG CCCGAATCGT TCCAGACGCT GCCGCCGCCG
CGGCTCGATG CGGACCTGAA CGAGACGGCG CGCGTGTCGG CGCGCTTTAA CCTCGACACG
CGCAAGCCGC TCATCGTGTT CTGTCCGGGC GCCGAGTACG GCCCGGCCAA GCGCTGGCCC
CCCGAGCATT TCGCCGCGCT CGCGCAGAGC GTGAGCCAGT CCTTTCCGTA CACGCAGATC
GTCGCGCTCG GCTCGCCGAA GGACGCCGCG GCCGCGCAGG CGATCGCCGA GCGCGCGCCG
AACGTGCGCA GCCTCTGCGG CCAGACCTCG CTCACCGAGG CGTGCGCGCT GATCGCGCGC
GCGAACGCGG TCGTCACGAA CGATTCCGGG CTGATGCACG TCGCGGCGGC GCTGCGCCGG
CCGCTCGTCG CGCTCTACGG ATCGACCGAT CCGCGTCATA CCCCGCCGCT GTCGGAGCTG
GCAAAGGTAC AATGGCTGCA TCTCGAATGC AGTCCCTGCT TCGAACGCGA ATGCCCGCTC
GGCCACCTGA AGTGCCTGCG CGAGCTGAGC CCGGAGCAGG TGTTCGGCGA TTTGCGCGGG
ATGCTCGTCG GACAGCGCTG A
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| Protein sequence | MRRALVIAPN WIGDALMAQP LFALLKKLHP RIVIDAVAPA WVAPVLERMP EIHDVHATEL
AHGKLQMLHR WQLASDLREL GYDAAYVLPN SLKSALIPWL AGIPLRIGYT GEHRYALLNV
RHANPGKARE TRAPMAQHYA ALAYAPGAKL PESFQTLPPP RLDADLNETA RVSARFNLDT
RKPLIVFCPG AEYGPAKRWP PEHFAALAQS VSQSFPYTQI VALGSPKDAA AAQAIAERAP
NVRSLCGQTS LTEACALIAR ANAVVTNDSG LMHVAAALRR PLVALYGSTD PRHTPPLSEL
AKVQWLHLEC SPCFERECPL GHLKCLRELS PEQVFGDLRG MLVGQR
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