Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_0980 |
Symbol | |
ID | 3691682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1029195 |
End bp | 1031180 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637727436 |
Product | O-antigen polymerase family protein |
Protein accession | YP_332392 |
Protein GI | 76809217 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCGAT GGAGCGATCG CCGGGAATGG GTCTTGCGCG GCATGGCGGC CGTCCGGCGG CGGATAGGGC GCGGGCGGCG CGGCGGCCGC GCACCGCGAT GGTGCGCCGC GCGATGTCGG TGCGTGTCGG ACGCCCGCGC CCGCACAGCA CGGGGTTTTT TTTGTATAGT GCGCCGGTTG CTGACACCCG GTTTGCTCAT GCCTTCTTCC TTTCTGCGTT CTCTATCGCT GATCGCGCTT GCCGTCGCCC TGATCCTGCC GTATGCGATC ACGAACCACA CCTATCCGAT CCCGACCTTC TATTCCGAAT TCGCCGCGTT CGCGCTGTAT TGGGGGCTCG GCGCGAGCGT CGTCCTGCTC GTGAAAGCCG AGCGCGCCGA GCAGCCGTTC GCGGCGCCGA TGGCGCTCGT CGCGCCGCTC GGGTTCGGCG CGGTATTGCT TGCGCAGATC GCGCTGCTGC CGCTGCGCCA GCCCTCGATG AACTGGCTCG CGATGGGCTA CCTGCTCGGC GCGCTCGTCG CGATGCAGGC CGGGTATGCG CTCGCGCGCG TGAACATGGT CGATATGGTC GCGCGGATGA TCGCGGGCGC GACGATCGTC GGCGGCGTCG TCGCGGTCGC CTGCCAGTTC GTGCAGCTGT TCCATCTGGA GACGACGTTC TCGCCGTTCG TCGTGTCGTA TGGCGTGACC GTCGAGCGCC GCCCGTACGG CAACATGGCG CAGGCCAACC ACTTGGCGAC CTATATCGCG TTCGCGCTCG CGGGCGCGCT CTATCTCGTG CAGACGCGGC GGATGCCGGC GCTCGCGTGG GCGGCGCTAT CGGCGCTGCT GTCGGTCGGG CTCGCGCTGA CCGTGTCGCG CGGGCCTTGG CTGCAGGTCG GCGTGATGGT GGTCGCCGGC TTCTGGATGG CGTTCGCGCA GGCCCGGCGC GACCCGGCGG CGAGCCGCGC GCGCGCGTGG GCGATTCCCG TCGTGCTCGG CGTGCTGTTC GTCGCGGTCA ACGTCGCGGT GCGCTGGGCC AACGTGCACT ACCATCTCGG CCTCGCGGAA TCCGCCGCGG ACCGCATGCG CGACGCCGGT CAGATCGCGC CGCGCCTCGC GCTCTGGAAG TACGGCCTCA CGATGTTCCG CGAGCATCCG CTGCTCGGCG TCGGCTGGGG CGAGTTCCCG ATCCACCAGT TCGAGCTCGC GCGCCGGCTG GGCGGCGTCG AGATCGCGAA CAACTCGCAC GACATCTTCA TCGATCTGCT CGCGAAATCC GGCTTGCTCG GCCTCGGCGT GCTGTTCGTC GCGCTCGTCG CGTGGTTCGT GCGCGCGCTG CGCGTGCCGC ATACCGAGAG CCGCGTGTTC GGTTTCGCGC TCGTCGGCAT CGTGCTGATG CATGCGCTCG TCGAATATCC GCAGCAGTAC ACGTTCTTCC TGCTGCCCGT GATGTTCGTG ATCGGCCTGC TCGAGACGAA GCCGCTACGC GCGCTGCCCG GCCGCGCGGC GTTCGTGCTG TTCGCGGCGC TATCGGTGGC GGGGCTTGCG TCGCTGTATC CGATCCTGCG CGACTACCAG CGCGCCGAGG TGCTGTATTA CGGCACGAAT CCGGCCGAGC AATACCGCGC GCACCAGTCG TTCCTGTTCG GCGCCTGGGG GGATTACGGC GCGGCGACGC TGCTCGCGAT CTCGCGCGAG AACCTGCCGG CGAAGCTCGC CGCCCACGAA AGCGCGATCG CGCTGCTGCC GGGCGAGACG GTGCTGCGCC GCTACGCGGT GCTGCAGGCG CTCGACGGCC GCGAGACCGA CGCGCTCGAT ACGATCGAGC GTTTGCGCGT GTTCGCGGAG GAGCTGCACG ACTGGCCGGT GCAGCTCGCC GCGCTGTACA AGCTGCTCGA CGACCAGCCG TCGCTGAAGT CGTTCAAGGC GGCGCTCGTC GCGAAATACG GGACGCCCGC GGCGAACCTG TCGGCGGACG ACGAGGAAGA CGACGGCGAC GATTGA
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Protein sequence | MTRWSDRREW VLRGMAAVRR RIGRGRRGGR APRWCAARCR CVSDARARTA RGFFCIVRRL LTPGLLMPSS FLRSLSLIAL AVALILPYAI TNHTYPIPTF YSEFAAFALY WGLGASVVLL VKAERAEQPF AAPMALVAPL GFGAVLLAQI ALLPLRQPSM NWLAMGYLLG ALVAMQAGYA LARVNMVDMV ARMIAGATIV GGVVAVACQF VQLFHLETTF SPFVVSYGVT VERRPYGNMA QANHLATYIA FALAGALYLV QTRRMPALAW AALSALLSVG LALTVSRGPW LQVGVMVVAG FWMAFAQARR DPAASRARAW AIPVVLGVLF VAVNVAVRWA NVHYHLGLAE SAADRMRDAG QIAPRLALWK YGLTMFREHP LLGVGWGEFP IHQFELARRL GGVEIANNSH DIFIDLLAKS GLLGLGVLFV ALVAWFVRAL RVPHTESRVF GFALVGIVLM HALVEYPQQY TFFLLPVMFV IGLLETKPLR ALPGRAAFVL FAALSVAGLA SLYPILRDYQ RAEVLYYGTN PAEQYRAHQS FLFGAWGDYG AATLLAISRE NLPAKLAAHE SAIALLPGET VLRRYAVLQA LDGRETDALD TIERLRVFAE ELHDWPVQLA ALYKLLDDQP SLKSFKAALV AKYGTPAANL SADDEEDDGD D
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