Gene BURPS1710b_0979 details

Gene Information

• Locus tag: BURPS1710b_0979
• Symbol: pilA
• ID: 3691322
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: +
• Start bp: 1028532
• End bp: 1029155
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 637727435
• Product: PilA
• Protein accession: YP_332391
• Protein GI: 76812046
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4969] Tfp pilus assembly protein, major pilin PilA
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGATG TTCTTTCCGT TTTACCGCCG CTTTCGCTGC TTGCGCTCCG GCGCATGGGC 
ATCGCGCGCG GTCTGCGCCG CGTGTGGCGC GTGTCGCGGC GCCGGTTGCG CGCTCGCGGT 
TTCACGCTGA TCGAATTGAT GATCGTGCTC GCGATCGTCG GCGTCGTCGC CGCGTACGCG 
ATTCCCGCCT ATCAGGATTA TCTCGCGCGC AGCCGGGTCG GCGAGGGGCT CGCGCTCGCC 
GCGTCCGCGC GGCTCGCGGT TGCCGAGAAC GCGGCGAGCG GCAATGGATT CTCGGGCGGC 
TACGTGTCGC CGCCCGCCAC GCGCAACGTC GATTCGATCC GGGTCGACGA CGACTCCGGG 
CAGATCGTCG TCGCGTTCAC GACGCGCGTG GCGGCGGCGG GCGCGAATAC GCTCGTGCTG 
GTGCCGTCCG CGCCGGATCA GGCGGATACG CCGACGGCGC GTGTCGCGTT GTCGAAGGGC 
GCCGTCCAGG CGGGGGCGAT CACGTGGGAA TGCTTTGCCG ACGGCAAGGC GTCGTCGTCG 
CTGCCCGCGC CGGGCGCCGG CCCGCTGCCG ACCGATGCGC CGACGCTGGC CGGCAAGCTG 
GCGCCCCCCG AGTGCCGCGC GTGA 

 

Protein sequence

MSDVLSVLPP LSLLALRRMG IARGLRRVWR VSRRRLRARG FTLIELMIVL AIVGVVAAYA 
IPAYQDYLAR SRVGEGLALA ASARLAVAEN AASGNGFSGG YVSPPATRNV DSIRVDDDSG 
QIVVAFTTRV AAAGANTLVL VPSAPDQADT PTARVALSKG AVQAGAITWE CFADGKASSS 
LPAPGAGPLP TDAPTLAGKL APPECRA