Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_0543 |
Symbol | |
ID | 3690538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 547075 |
End bp | 548010 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637726999 |
Product | hydroxymethylglutaryl-CoA lyase |
Protein accession | YP_331957 |
Protein GI | 76809037 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCTCC CCCAATCCGT GAAGATCGTC GAAGTCGGCC CGCGCGACGG GCTGCAGAAC GAGCAAACGT TCGTGCCGAC CGGCGTGAAG ATCGAGCTCG TGAACCGGCT GTCGCAAGCC GGTTTTCGCA ACGTCGAGGC GGCGTCGTTC GTGTCGCCGA AATGGGTGCC GCAGATGGCC GACGGCGCCG ACGTGATGGC CGGCATCGCG CGCCGCGCGG GCACGATCTA CTCGGCGCTC ACGCCGAACC TGAAAGGCGT CGAAAACGCG CTCGCCGCGC GCGCCGACGA AGTCGTGATT TTCGGCGCGG CGAGCGAGGC GTTCTCCCGG CGCAACATCA ACTGCAGCAT CGCCGAGAGC ATCGCGCGCT TCGAACCGGT CGCGCGCGCG GCGAAGGATG CGGGCGTGCG GCTGCGCGCG AGCGTGTCGT GCGCGCTCGG CTGCCCGTAT CAGGGCGACG TGCCTCTCGA AGCGGTCGTC GACGTCGTCG AGCGCCTCGC CGCGCTCGGC TGCGACGAGA TCGACATCGC CGATACGATC GGCGTCGGCA CGCCGGGCCG CACGCGCGCG GTGCTCGACG CGGTCGCGAA GGCGTTTCCG CGCGAGCGGC TGTCGGGCCA CTTCCACGAC ACCTACGGGC AGGCGCTCGC GAACATCTAT GCGGCGCTCC TCGAAGGCAT CGCGATCTTC CATGCGTCGG TCGCGGGCCT CGGCGGCTGC CCGTACGCGA AAGGCGCGAC GGGCAACGTC GCGACGGAAG ACGTGCTGTA CATGATGCGC GGGCTGAACA TCGAGACGGG GGTCGACCTC GATCAGGTCG TCGCCGCCGG CGATTTCATC TCGAACGCGA TCGGCCGCGC GAACATCTCG CGCGCGGGGC GCGCGCTGCT CGCGAAGCAA CGCGCGGCCG CCGAGCCGCC GTCCGCCTGC GCGTGA
|
Protein sequence | MTLPQSVKIV EVGPRDGLQN EQTFVPTGVK IELVNRLSQA GFRNVEAASF VSPKWVPQMA DGADVMAGIA RRAGTIYSAL TPNLKGVENA LAARADEVVI FGAASEAFSR RNINCSIAES IARFEPVARA AKDAGVRLRA SVSCALGCPY QGDVPLEAVV DVVERLAALG CDEIDIADTI GVGTPGRTRA VLDAVAKAFP RERLSGHFHD TYGQALANIY AALLEGIAIF HASVAGLGGC PYAKGATGNV ATEDVLYMMR GLNIETGVDL DQVVAAGDFI SNAIGRANIS RAGRALLAKQ RAAAEPPSAC A
|
| |