Gene BURPS1710b_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_0346 
Symboldef 
ID3689602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp363145 
End bp363648 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content62% 
IMG OID637726802 
Productpeptide deformylase 
Protein accessionYP_331761 
Protein GI162210090 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTGC TGAACATTCT TCACTACCCC GATAAACGGC TGCACAAGGT GGCCAAGCCG 
GTCGCCAAAG TGGACGACCG CATTCGCAAG CTCGTCGCCG ACATGGCCGA GACGATGTAC
GCGGCGCCCG GCATCGGCCT TGCTGCGACG CAGGTCGACG TGCATGAACG CGTGATCGTG
ATCGACGTGT CCGAGGACAA GAACGAACTG CGCGTCTTCA TCAACCCGGA AATCGTCTGG
ACGGGCGACG GCAAGCAGGT CTATGAGGAA GGCTGCCTGT CGGTGCCGGG TGTCTATGAC
GAAGTGGAGC GCCCGGACCG GGTGCGCGTG CGCGCGCTCG ACGGCCAAGG CGAGCCGTTC
GAGCTCGATT GCGAAGGGCT GCTCGCGGTG TGCATCCAGC ACGAGATGGA TCACCTGATG
GGTCGCGTGT TCGTCCAGTA TCTGTCGCCG CTCAAGCAGA CCCGGATCAA GACGAAGATG
AAGAAACTCG AACGCGCAAT GTGA
 
Protein sequence
MALLNILHYP DKRLHKVAKP VAKVDDRIRK LVADMAETMY AAPGIGLAAT QVDVHERVIV 
IDVSEDKNEL RVFINPEIVW TGDGKQVYEE GCLSVPGVYD EVERPDRVRV RALDGQGEPF
ELDCEGLLAV CIQHEMDHLM GRVFVQYLSP LKQTRIKTKM KKLERAM