Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_0346 |
Symbol | def |
ID | 3689602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 363145 |
End bp | 363648 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637726802 |
Product | peptide deformylase |
Protein accession | YP_331761 |
Protein GI | 162210090 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTTGC TGAACATTCT TCACTACCCC GATAAACGGC TGCACAAGGT GGCCAAGCCG GTCGCCAAAG TGGACGACCG CATTCGCAAG CTCGTCGCCG ACATGGCCGA GACGATGTAC GCGGCGCCCG GCATCGGCCT TGCTGCGACG CAGGTCGACG TGCATGAACG CGTGATCGTG ATCGACGTGT CCGAGGACAA GAACGAACTG CGCGTCTTCA TCAACCCGGA AATCGTCTGG ACGGGCGACG GCAAGCAGGT CTATGAGGAA GGCTGCCTGT CGGTGCCGGG TGTCTATGAC GAAGTGGAGC GCCCGGACCG GGTGCGCGTG CGCGCGCTCG ACGGCCAAGG CGAGCCGTTC GAGCTCGATT GCGAAGGGCT GCTCGCGGTG TGCATCCAGC ACGAGATGGA TCACCTGATG GGTCGCGTGT TCGTCCAGTA TCTGTCGCCG CTCAAGCAGA CCCGGATCAA GACGAAGATG AAGAAACTCG AACGCGCAAT GTGA
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Protein sequence | MALLNILHYP DKRLHKVAKP VAKVDDRIRK LVADMAETMY AAPGIGLAAT QVDVHERVIV IDVSEDKNEL RVFINPEIVW TGDGKQVYEE GCLSVPGVYD EVERPDRVRV RALDGQGEPF ELDCEGLLAV CIQHEMDHLM GRVFVQYLSP LKQTRIKTKM KKLERAM
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