Gene BURPS1710b_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_0238 
Symbol 
ID3688984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp249358 
End bp250119 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content68% 
IMG OID637726694 
Producthypothetical protein 
Protein accessionYP_331654 
Protein GI76809459 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1346] Putative effector of murein hydrolase 
TIGRFAM ID[TIGR00659] conserved hypothetical protein TIGR00659 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATTCG TTGATGGCAC CGGTTCCGAA GGCCGCATCA TGACGACGCC CGATCTCTCG 
TTTCTCACCG CGCCTTCGAG CGCCGCGATT TCCGCCGGCT GCTTCGCGCT GACGATCGCG
CTCTACTTCG CGTCGAAGCG GCTCTACGCG TGCCGCAAGA CGCTGTTCTT CTCGCCGCTC
GTGCTCGTGC CGGCCGTGCT CGTCGCGTTC GTCGCGCTGA CGGGCATTCC GTACGCGGTG
TACTTTCGCG ACACGCGCTG GCTGATGTGG CTGCTCGGCC CGGCGACGAT CGCGTTCGCC
GTGCCGATCT ACGAATACCG CGAGCTGATG AAGCGCCACT GGTTCTCGCT CGCGGTGGGC
GTCGTCGTCG GGATCGCGGT CGCGATCTGC GGCTCGCTGC TGCTGTCGAA GCTGCTGCAT
CTGTCGCCCG AGCTGCAGCG CAGCCTCGTC ACGCGCTCGG TGTCGACGCC GTTCGCGCTC
GCCGTCTCCG ACCGGATCCA CGCGCCGCGC GATCTCACCG CGCTCTTCGT GATCGCGACC
GGGATTTGCG GGATGCTCGT CGGCGAATTC GTGCTCGCGC TCGTGCCGCT GCGCTCGCGG
CTCGCGCGCG GCGCGCTGTT CGGCGCGGCC GCGCATGCGG TGGGCACCGC GAAGGCGCGC
GAGATCGGTA GCGAGGAAGG CGTCGTGTCG AGCCTCACGA TGATGATCGC GGGCGTCGCG
ATGGTGCTGA TCGCGCCGTT GCTGACGTTG CTGCCGATCT GA
 
Protein sequence
MPFVDGTGSE GRIMTTPDLS FLTAPSSAAI SAGCFALTIA LYFASKRLYA CRKTLFFSPL 
VLVPAVLVAF VALTGIPYAV YFRDTRWLMW LLGPATIAFA VPIYEYRELM KRHWFSLAVG
VVVGIAVAIC GSLLLSKLLH LSPELQRSLV TRSVSTPFAL AVSDRIHAPR DLTALFVIAT
GICGMLVGEF VLALVPLRSR LARGALFGAA AHAVGTAKAR EIGSEEGVVS SLTMMIAGVA
MVLIAPLLTL LPI