Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_0054 |
Symbol | nylA |
ID | 3689412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 57631 |
End bp | 59121 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637726510 |
Product | 6-aminohexanoate-cyclic-dimer hydrolase |
Protein accession | YP_331471 |
Protein GI | 76811561 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTGTGC TGTCCGACTA TCTGTGCCAC GACGCAATCG GGCTCGCGCA GCTCGTCGCG CAGCGCGAAG TCAGCGCGCG CGAACTGCTC GACGCCGCGA TCGGCCGCGC GCAAGCGCTC AATCCGGCGA TCAACGCGAT CGTGCTGAAC GACTACGCGG CCGCGCGCGA GCGCGCGGCG AGCGGCACGC TCGCGGGCCC GCTCGCCGGC GTGCCGTATC TCGTCAAGGA TCTCGGCTCC GCGGTCGCGG GGCTGCCGCT GTCGCTCGGC AGCCGTCACT ATCGCCATCA TGTGCCGGCC GAGGATTCGC CGCTCATCGT GCGAACGAAG GCGGCCGGGC TCAACATCTT CGGCAAGACC AACACGCCCG AGCTCGGGCA GATGCCGTAC ACCGAATCGG CGCTGCTCGG CGTGTGCCGC AACCCGTGGA ACCTCGATCA CACGCCGGGC GGCTCGAGCG GCGGCGCGGC GGCGGCCGTC GCCGCGGGCA TCGTGCCGCT CGCGCATGCG TCCGACGGCG GCGGCTCGAT CCGGATTCCC GCGTCGTGCT GCGGCCTGTT CGGCTTCAAG CCGTCGCGCG ACCCGGCGCT GACACCGTGG CCCGTGCCGG GCGAGATCGT CGTCGAGCAT GCGGTGTCGC GCAGCGTGCG CGACAGCGCG CTGCTGCTCG ACATCACGAC CGGGCGAACC GCGCCGGGCA CGCTCGAAGG CGTCGGCGCG CCCGGCACGT ATCTCGGCGC GCTCGACGCG CCGCCGCCCG CGCTGAAGAT CGGCTACGTG ACGGACCCGA TGCTCGCGCC GGCGCTGTCG GCCGACGTGC GCGACGCGCT CGATCGCGCG GCGGCGCTTG CCGCATCGCT CGGGCACAAC GTCGAGCCGG CGACGCTCAA CCTCGATTTC GCGCAGATCG GCGAGGTATT CCTGACGATC TGGGCCGCGA TCGCCGACGA GCTCGTGCTC GGCGCGGAGC GCATCACCGG GCGCAAGCCC GCGCGCGCCG AATTCGAGCC GGCGACGTGG GCGATGGCGC AGGTCGGCCG CCGGCTCGTG CGTGAGCGGC TGCCGCACGC GCTCGAGCTG CAGCGGCAGA TCACCGCGCG CGTCGCGGGC CTCGTGTCGC GCTACGACGT GCTGCTGTGC GCGACGCTCG CCGCGCCGCC GATCAAGATC GGCGAAATGC AGCCGACGCC GCTCGAGACG CGGCAGATGG AGCTGCTCGG CGTGCTGCCG ATAAAGCCGC TCCTCAAGCG CATGCTCGCG GAGGTGTCGC ACCAGGCGTT CGCGTGGGCG GGCTGCACGG AGCTCTTCAA CCTGACCGGG CAGCCGGCGA TGTCGGTGCC GCTGCACTGG AGCGCGCGCG GGCTGCCGGT CGGCGTCCAG TTCGTCGCAC GGCACGGTGA CGATGCGCGC CTGTTCGCGC TCGCGCGTCA GCTCGAGCTC GCGCAGCCGT GGTTTGACAA ACGCCCGCCG CTCGCACGCG CGCAGGCGTG A
|
Protein sequence | MTVLSDYLCH DAIGLAQLVA QREVSARELL DAAIGRAQAL NPAINAIVLN DYAAARERAA SGTLAGPLAG VPYLVKDLGS AVAGLPLSLG SRHYRHHVPA EDSPLIVRTK AAGLNIFGKT NTPELGQMPY TESALLGVCR NPWNLDHTPG GSSGGAAAAV AAGIVPLAHA SDGGGSIRIP ASCCGLFGFK PSRDPALTPW PVPGEIVVEH AVSRSVRDSA LLLDITTGRT APGTLEGVGA PGTYLGALDA PPPALKIGYV TDPMLAPALS ADVRDALDRA AALAASLGHN VEPATLNLDF AQIGEVFLTI WAAIADELVL GAERITGRKP ARAEFEPATW AMAQVGRRLV RERLPHALEL QRQITARVAG LVSRYDVLLC ATLAAPPIKI GEMQPTPLET RQMELLGVLP IKPLLKRMLA EVSHQAFAWA GCTELFNLTG QPAMSVPLHW SARGLPVGVQ FVARHGDDAR LFALARQLEL AQPWFDKRPP LARAQA
|
| |