Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_0008 |
Symbol | paaB |
ID | 3690545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 8747 |
End bp | 9691 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637726464 |
Product | phenylacetic acid degradation protein PaaB |
Protein accession | YP_331426 |
Protein GI | 76809044 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3460] Uncharacterized enzyme of phenylacetate metabolism |
TIGRFAM ID | [TIGR02157] phenylacetate-CoA oxygenase, PaaH subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0391689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGCGGAT GTCGGCGTGA TCGGCTGGCT CGTCGACGGC GCGGCGATCA TGAACCAGGT TCCGCTCTGC CGCTGCACGT ACGGCCCGTA TGCGCGCGCG ATGATCCGCG TCTGCAAGGA GGAATCGTTC CATCAGCGGC AAGGCTTCGA CGCGCTGCTC GCGATGATGA AGGGCACCGA CGCGCAGCGC GCGATGGTCC AGGAAGCCGT GGACCGCTGG TGGTGGCCCG TGCTGATGAT GTTCGGGCCG CCCGACGCCG ATTCCGTGCA CAGCAACCAG TCGGCCAAAT GGGGGATCAA GCGGATTTCG AACGACGACC TGCGGCAGAA ATTCGTCGAC GCGACGGTCG AGCAGGCGAA GGTGCTCGGC GTCACGCTGC CCGATCCGGA CCTCAAGTGG AACGACGCCC GCGGCCATTT CGATTACGGC GCGCTCGACT GGGACGAATT CTGGCGCGTC GTCAACGGCG ACGGCCCGTG CAACAAGGAG CGCCTCGCGA CCCGCGTGAA GGCTCACGAA AACGGCGCGT GGGTTCGCGA CGCCGCGCTC GCGCACGAGG AAAAGCGCCG CCGTCGCGCG CAGCAACAAG CGGCCTAACC GGCATGACGC GCGGCAAGCG CGGTGCCGCG ATCCGCATTC AGGAGATTCA GGAGAAAGCG ATGAACAACG AATGGCCCAT CTGGGAAGTT TTCGTGCGCA GCAAGCAAGG GCTCGACCAC AAGCACTGCG GAAGCCTGCA CGCGGCCGAC GCGTCGATGG CGCTGCGCAT GGCGCGCGAC GTCTACACGC GCCGCCGGGA AGGCGTGAGC ATCTGGGTCG TGCCGTCGGC GGCAATCACC GCGTCCGATC CGAACGAGAA GGCCGAGATG TTCGAACCGG CGGGCGACAA GATCTATCGT CATCCGACGT TCTACACGCT GCCCGACGAA GTCAACCACA TGTGA
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Protein sequence | MGGCRRDRLA RRRRGDHEPG SALPLHVRPV CARDDPRLQG GIVPSAARLR RAARDDEGHR RAARDGPGSR GPLVVARADD VRAARRRFRA QQPVGQMGDQ ADFERRPAAE IRRRDGRAGE GARRHAARSG PQVERRPRPF RLRRARLGRI LARRQRRRPV QQGAPRDPRE GSRKRRVGSR RRARARGKAP PSRAATSGLT GMTRGKRGAA IRIQEIQEKA MNNEWPIWEV FVRSKQGLDH KHCGSLHAAD ASMALRMARD VYTRRREGVS IWVVPSAAIT ASDPNEKAEM FEPAGDKIYR HPTFYTLPDE VNHM
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