Gene BURPS1106A_A3030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A3030 
Symbol 
ID4904388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp2944670 
End bp2946985 
Gene Length2316 bp 
Protein Length771 aa 
Translation table11 
GC content73% 
IMG OID640146133 
Productsensory box histidine kinase/response regulator 
Protein accessionYP_001077059 
Protein GI126456548 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAATT TTGTACGAGG ACACGCAAAA AATTACGCGG CGGTGACGGG TTTCATCGCG 
ATCGGCACGT TGCTGCAGGC GGCGCTCGTG CGCTTCGGCG GCGCCGACAT GCCGCTCGCG
CCGTATTTTC CGTTCATCGC GGCGGCCGCC TGGGCGACGT CGCTCGCGGG GGGGATCGCC
GCGACCGCCG CGAGCGCGGC GCTCGCGTGG CTGCTGTTCC TGAACGATCC GGCCGCGTAT
CCGGCGCCGC TCGCGGGGCG GCTCATGCAG CTCGCGACGT TCGCCGTCGT GAGTTGCGCG
ATCTGCGCGA TCGTCGTCGC GCTCAAGGGC TCGCGCCGCG CGAACGACGC GTTGCGCCGC
CGCGAGGCGG GGGCGCGCCG CTACTACGAG ACCCTGCTGC AGTCGCTCAC GCAGGGCGTC
GTCGTCAGCG ACCGGCACGG CATGCTCACG TACATGAACC CGAGCGCGGC CGCGCTGATC
GGCTGCGATG CGACGGCCGT GCGCGGTCTG CCGTTTCGCG ACGTGTACCG CGCCTACGAC
GGGCGCGGCG CGCGCGTGCG CGCGTCCGCG CTCGAGCACG TGCTGAGGAG CGGCAGGAGC
GCGAGCGTCG AAGGGCACTG GCTCGCTCCG CACGACGGGC AGCGGGTGCC GATCGCCGAA
GCCGCGTCGC CGCTCGTCGA TTCGGCGGGC GACATGACGG GCGCGGTGCT GATCGTGCGC
GACATCAGCA TCGAGCGCGA GCGATCGGCG GCCAGCCAGA TGCTGCGGCG GCTCGTCGAG
GCCTCGCCCG ACGCGATCGT CGGGGTCGGC TCGAATCGCC GCATCACGAG CTGGAACCCG
GCCGCGCGCC GGATGTTCGG CTACGACGAG CACGCGGCGC GCGGGTGCGA CGTCGCGATG
CTGATCGCGC CGCGCTGGCT GCGCAATCAT CCGCTGCCCG AATCGGTGCC CGACATGCGC
GAGCCGATCG AGAACGTCGA CGTGCTGTGC GTGCGGCAGG ACGGCGGGCG GATGCGCGCG
ACGATGTCGG CGTCGCCCGT GTTCGACGAG CGCGACGCGT GCATCGCGCT GTCGCTGACG
CTGCGCGACA CGGGCGAGCA GCGCCGGCGC GAACGCCGCG TGCACCGCTC GCTGCGCGGC
GCGCGCGACG CGCGCCGGCA GGCCGACACG TCGAACCGGC TGAAGGACGA GCTGCTCGCC
ACCGTGTCGC ACGAGCTGCG CACGCCGCTG AACGTGATCT ACGGCTGGAT CGAGGTGCTG
CGCAATCCGG TGGACGGCGC GCTGCAGCAG CAGGCGATCG ATGCGATCGA CCGCAGCGCG
CGCTCGCTGT CGCGGATGGT CGGCGACATT CTCGATGCAT CGTCGCTCGC GACGGGCAAG
CTGCGGCTCG ATGCGATGCC GGTCGATCTC GTGCGCATCG TCAACGACGT GACGGGCGCG
CTCGGCGCGG CCGCGCAGGC CGACGGGATC GCGCTGTCGG TCGAATGCGC GCTCGGCACG
TGCATCGTGT CCGGCGACGG CGAGCGGCTG CGGCAGATGC TGTCGAACCT GCTGTCGAAC
GCGTTCAAGT TCACGCCGCG CGGCGGCCGC GTGACCGTGT CGCTCGAGCG CCACGACGCG
CAGGCGAAGC TGACGGTCGC CGATACGGGC CAGGGCATCT CGCCCGAATT CCTGCCGCAC
GTGTTCGAGG CGTTCCGGCG CGCGGAAGGC GCGCCCGCAT CGCCGCGGCG CGGGCTCGGC
CTCGGGCTGT CGATCGTGCG GCACATCGCG GAGCTGCACG GCGGCAAGGT CGAGGCCGCG
AGCGCGGGCA AGAACCGCGG CACGACGTTC GCGATCACGC TGCCCGCCGG CTGGCAGCCG
ATGGGCGCGC TCGCATGGGC CGCGCAGGCC GAGGGCGGCG CGCGGATGAC GCTCGACGCG
CAGCGGATCC TGCTCGTCGA CGACGACGCG ACCTCGCGTG CGAGCCTGGC CGCCGCGCTG
AAGACGCTCG GCGCGGAGGT GGTCGTCGCG TCGTCGGGGC GCGAGGCGAT CGGGAAGGTG
GACGCGATGC GGCCGACCGT CGTGCTGTCC GATCTCGCGA TGCCCGACGG CGACGGCTAC
TGGCTGCTCG ACACGCTGCG CCACGTGGAC GCGGATGCGG ATGCGGACAC GCGCACGCGC
GCGGCGAACG ACGCGCCGGT GCTCGCCGTC ACCGCGCATG CGGGGCGCGA CAGCGAGCGG
CGCGTGCTCG CGGCGGGCTT CGACGGCTAT CTATGCAAGC CGGTCGATCT GCAGACGCTC
GCGCGTGCGA TCCTGCGCGC GACGGGCAGC GGCTGA
 
Protein sequence
MANFVRGHAK NYAAVTGFIA IGTLLQAALV RFGGADMPLA PYFPFIAAAA WATSLAGGIA 
ATAASAALAW LLFLNDPAAY PAPLAGRLMQ LATFAVVSCA ICAIVVALKG SRRANDALRR
REAGARRYYE TLLQSLTQGV VVSDRHGMLT YMNPSAAALI GCDATAVRGL PFRDVYRAYD
GRGARVRASA LEHVLRSGRS ASVEGHWLAP HDGQRVPIAE AASPLVDSAG DMTGAVLIVR
DISIERERSA ASQMLRRLVE ASPDAIVGVG SNRRITSWNP AARRMFGYDE HAARGCDVAM
LIAPRWLRNH PLPESVPDMR EPIENVDVLC VRQDGGRMRA TMSASPVFDE RDACIALSLT
LRDTGEQRRR ERRVHRSLRG ARDARRQADT SNRLKDELLA TVSHELRTPL NVIYGWIEVL
RNPVDGALQQ QAIDAIDRSA RSLSRMVGDI LDASSLATGK LRLDAMPVDL VRIVNDVTGA
LGAAAQADGI ALSVECALGT CIVSGDGERL RQMLSNLLSN AFKFTPRGGR VTVSLERHDA
QAKLTVADTG QGISPEFLPH VFEAFRRAEG APASPRRGLG LGLSIVRHIA ELHGGKVEAA
SAGKNRGTTF AITLPAGWQP MGALAWAAQA EGGARMTLDA QRILLVDDDA TSRASLAAAL
KTLGAEVVVA SSGREAIGKV DAMRPTVVLS DLAMPDGDGY WLLDTLRHVD ADADADTRTR
AANDAPVLAV TAHAGRDSER RVLAAGFDGY LCKPVDLQTL ARAILRATGS G