| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2974 |
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| Symbol | |
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| ID | 4903973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 2895758 |
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| End bp | 2896822 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640146077 |
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| Product | outer membrane porin |
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| Protein accession | YP_001077003 |
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| Protein GI | 126455644 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.598026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGAGCAA CGACATGGCC GATCGCGATC GGCCTCGCGC TAGCGGGCCC GGCGTTCGCG
CAAAGCTCGG TCGCGCTGTA CGGCATCGTC GATCAGAGCG TGCGCTACAC GACGCACGCG
AGCGCCGCGA ACGACAGCGC CGTGCAGATG GCGAACGGCG CGATCACGAA CAGCCGCTGG
GGCATGAAGG GCGCCGAGGA TCTCGGCGAC GGCCTGAAGG CGATCTTCCG CCTCGAGAAC
GGCTTCGAGC CGCAGTCGGG CCAGGCCGAC GGCGCCCGCC TGTTCGGCCG CTACGCATAT
GTCGGCCTGT CGGGCCGCCT CGGCACGGTG GAACTCGGCC GCCAGACGAC CGAGGGCTTC
AACCTGTTCG GCGATCTCGA TCCGCTGACG ATCGGCAACT ACACGGCGAA CATGTGGCCG
TACTTCCTCA CGCAGGGCTA CGCGAACAAC GTCGTCAGCT ATGCGAACAC GCTCGGCGGC
CTCGCGGTGG GCGCGAGCTA CGGCTTGGGC GGCGTCGCGG GCGCGATGAG CCGCAACGCC
TACTGGGGCG TGCGCTCCGC GTACACGCAC GGCGCGCTCA CGGTCGGCGC CGTCTATCAG
CAAACGCGCG ACGCAGACGG CCGCGCGCAG CAGATGTGGG GGGCGGCGGG CCGCTACGCC
GTCGGCCCCG CGACGCTGTT CGCCGGCTAT CTCGGCGGCA AGGACGCGAC GGGCGCGATC
GATCGCGACT ATCTGAACGC CCCCGGCCGC ACCGTCGCGT ACGGCTCGTT CGCCGATCAT
CCGCGCTACG ACGCGATCGG CTACGCGGGC GTCGCATACC GTGTCGACCC GGCGCTCATG
CTGACGGGCG CGTTCTATTA CGATGCGATC CGCAACGTGA ACGGCGTCGG CGGCAACGGC
GGCAAGCGCC GCGCGGGCGT GCTCGAAGCG GAGTATGCGC TGTCGAAGGC CACGCAGCTG
TATGCGAGCG CCGACTATAA CCAGGTCTGC GGCGGCGCCG CCACCGAGAT GCCCGGCCGG
GGCAACCAGA CGGGCGTCGC GCTCGGCCTG CGGCACATGT TCTGA
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| Protein sequence | MGATTWPIAI GLALAGPAFA QSSVALYGIV DQSVRYTTHA SAANDSAVQM ANGAITNSRW
GMKGAEDLGD GLKAIFRLEN GFEPQSGQAD GARLFGRYAY VGLSGRLGTV ELGRQTTEGF
NLFGDLDPLT IGNYTANMWP YFLTQGYANN VVSYANTLGG LAVGASYGLG GVAGAMSRNA
YWGVRSAYTH GALTVGAVYQ QTRDADGRAQ QMWGAAGRYA VGPATLFAGY LGGKDATGAI
DRDYLNAPGR TVAYGSFADH PRYDAIGYAG VAYRVDPALM LTGAFYYDAI RNVNGVGGNG
GKRRAGVLEA EYALSKATQL YASADYNQVC GGAATEMPGR GNQTGVALGL RHMF
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