| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2960 |
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| Symbol | |
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| ID | 4904422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 2883294 |
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| End bp | 2885366 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640146063 |
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| Product | type II/III secretion system protein |
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| Protein accession | YP_001076989 |
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| Protein GI | 126456485 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACCA AACCGCAACT TTTCCGGCCG ACGCCGGCGC GCTCGCGCGC CGTGCGCGGC
GCGGCGCTCG CCGCCGCGTG CTGCGCCGGG CTCTTCACCG TCTTCGCCGC GGCCGCCCAG
GACGCCGTCG AAAACGCCGC GATCGCGAAA GGCACGGCCG CCGCGCCGAT GGCGCTCGGC
CGCGCGCCGA TGCAGATGAC GATCAGCATG GCGCCCGCGC CCGCCGCCGG CGCCGCCGCA
GCGGCCGCCG CCGTGCCGTT GCGCGGTCCG AGCTGCGTCG GCGAGATGCG CGAGTCGACG
AGTGTGAGCG TGCCGCTCGG CAAATCGCTG CTCGTGCCGC TCGACGAGCC GGTGCGCAAC
CGCACGATCG GCAACCCCGC CGTCGCGCAG GCGACGATGG TGTCGCCGCG CACGCTCTAC
CTCGTCGGCA TGTCCGTCGG CACGACGAAC ATGATCGTTC AGGGCAAGAG CGGCGCGTGC
CGGATCATCG ATGTCGCCGT CGGCGCGGAC GCGGGCGGCC TGCAGGCGTC GCTGCGCCAG
TTGATGCCGC GCGAGCGCGA CATCCGCGTG TCGACCGCGG CGGACACGAT CGTGCTCGCG
GGCAACGTGT CGAGCGCGCA GGCCGCGCAG CAGGCGGTCG CGATCGCGAA GGCGTACAGC
AACCGCACGA ACGCCGGCGC GGCCGGCAGC GGCGGCGGCG CGCGCGCCGA CGTGCTGAAC
ATGCTGACCG TCACGTCGCC GCAGCAGGTG ATGCTCGAAG TGAAGGTCGC CGAGGTATCG
AAGACGCTGA TCAACCAGAT GGGATCGGCC GTCAACATCC AGGGCGGCTT CGGCTCGTGG
ACGGGCGCGC TCGTGACGAG CCTGCTCACG GGCGTGGGCA GCGGCATCGC GGCGAGCAAG
TCGAACAAGC TGCCGTTGAA CGGCTCGATC GACGCGCAGA ACACCGATCA GCCGGTGAAG
ATCCTCGCCG AGCCGCGGCT CGTCACGATC AGCGGCCAGG AAGCGACGTT CCTCGCCGGC
GGCAAGATCT TCATTCCGGT GCCGCAGAGC AGCGGCATCG GCACGAACAC GATCACGCTG
CAGGAAGAGG AGTTCGGCGT CGGGCTGAAG TTCACGCCGA CCGTGCTGTC GAACGGCCGG
ATCAGCCTGA AGGTCGCGCC GGAGGTGTCC GAGCTGTCGC CGACGGGCGT CACGCTGTCC
GCGGCGAACG TGGGCAACGT GTCGATCCTG CCGCTCATCA CGACGCGGCG CGCATCGACG
ACCGTGCAGA TGGGCGACGG CGAGACGTTC GCGATCGGCG GGCTCATCAA GGACAACGCG
CAGGGCACGC TCAAGGCGCT GCCCGGCATC GGCGAGCTGC CGGTGCTCGG CGCGCTGTTC
CGCAGCACGT CGTTCCAGCA GGACCGCACC GAGCTCGTGT TCATCATCAC GCCGCACCTG
GTGCAGCCGC TCGAGACCGC CGACGTGCCG CTGCCGACCG ACAGCTTCAC GAAGCCGAAC
GAAGCCGACG TCTATGCGAC GGGCAACATG GAAGGCCGCG GCGGGCTGCG TCAGCACGGC
GCCGCGCCGG CCGCCGCGCC CGCGAATGCC GCGCCCGGCG CCGCCGCGCC GACCGGTGCG
GCGCCCGCCA CCGCCGTGCC TGCGCCTGCC GCGCCCGCGC CTGCCGCACC CGCGGCGCCC
GCCGCCGCAG CCGCGCCCGC GAAGGACGCG GCTGCGAGCC CCGCGCCGGC GAAGCAGGCG
CCCATTGCCG CGCAAGCGCC CGCGCCGCAG CCGGCGAAGC CCGCGGCGAG CGCGCCCGCG
CCAGCGAACG CCCGCCCGCC GGCGACCGTG CAGGCGCCGC CGCCCGCACT GCCGTCCGCC
GCCGCGCTCG CGCAGCGGCA AGGCGCGCAC GCCGCCGCGC CGGACACGGC GCACGCCGGC
CCAGCCGAGA GCGCGACGGC AACCGCGTCG CCCGCGCCGG CCGCCGCGCT CGCGGCCCCG
GCCGCCGCCG GCGCGACCGC GAAGCGCCAG GGCGCGCAGC CGCCGCAACA ACTCGCCAAC
GCAGGCGCGA TCGCGCCCGC CGCCGATCGC TGA
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| Protein sequence | MDTKPQLFRP TPARSRAVRG AALAAACCAG LFTVFAAAAQ DAVENAAIAK GTAAAPMALG
RAPMQMTISM APAPAAGAAA AAAAVPLRGP SCVGEMREST SVSVPLGKSL LVPLDEPVRN
RTIGNPAVAQ ATMVSPRTLY LVGMSVGTTN MIVQGKSGAC RIIDVAVGAD AGGLQASLRQ
LMPRERDIRV STAADTIVLA GNVSSAQAAQ QAVAIAKAYS NRTNAGAAGS GGGARADVLN
MLTVTSPQQV MLEVKVAEVS KTLINQMGSA VNIQGGFGSW TGALVTSLLT GVGSGIAASK
SNKLPLNGSI DAQNTDQPVK ILAEPRLVTI SGQEATFLAG GKIFIPVPQS SGIGTNTITL
QEEEFGVGLK FTPTVLSNGR ISLKVAPEVS ELSPTGVTLS AANVGNVSIL PLITTRRAST
TVQMGDGETF AIGGLIKDNA QGTLKALPGI GELPVLGALF RSTSFQQDRT ELVFIITPHL
VQPLETADVP LPTDSFTKPN EADVYATGNM EGRGGLRQHG AAPAAAPANA APGAAAPTGA
APATAVPAPA APAPAAPAAP AAAAAPAKDA AASPAPAKQA PIAAQAPAPQ PAKPAASAPA
PANARPPATV QAPPPALPSA AALAQRQGAH AAAPDTAHAG PAESATATAS PAPAAALAAP
AAAGATAKRQ GAQPPQQLAN AGAIAPAADR
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