| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2909 |
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| Symbol | |
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| ID | 4904761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 2840751 |
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| End bp | 2842442 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640146012 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001076938 |
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| Protein GI | 126457654 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4632] Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.733186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGGACGA CGAAATCTCC CGGCATCTCC GTGATTCGGC AGCGGCTCGC CGTTGCGCTG
CCGCTTGCGT TGACGCTCAC CCTCGCGAGC TGCGGCGGTG ACGATCTGAC GCCCGCCGCG
CAGCGCTGGG CGATGCCCGG CACCGAACTG CCGCTCGGGC CGCAGGGCCT CGCGCAGAGC
GTGTCGACGC AGACGCTCGC CGCAGGCGTC GCCTATTACC AGATCAAGCG CGGCGCGGCG
AGCGCGGCCG ATTTCTGGAC CGTCAACCTC GGCTTCTACG CGACGCAGGC CGCGGCGCAG
GCCGATGCGG CGAATCTCGC GGCGGCCGGC TTCGCGACGC GCGTCGACGC GTCGGCGGGC
ACCGACCTGC AGGGCAAGGT GCTCGGCTAC TGGCTGTCGG CCGGCCGCTA CGCGACGCAG
GCCGAGGCGA CGGCGGCCGC CGCACGCATC GCGCAGGCCA CGCAGAACCG CTACAAGCCG
GGCACGCGGC ATACGTCGCT CGCCGGCGCG CCGACGACGG GGCCGTGGAT CGTCAACGTG
CTCGCGATCG ACCCGTCGCG CGCCGGCGCG GCGCTGTCGC TCGCGCTGCC GGGCGGCAAC
GATCTCGGTG CGGGCGGCGA GACGGTTTCG GCCGCGCGGG CGCGTGTGAA CGCGCTCGCC
GGCGTCAACG GCGGCTTTTT CACGAACATC AATCCGTTCG GCGCGCCGCT GCCGCCGCGC
TCACCCGTCG GCGCGACGGT AGTCGACGGG CGGCTCGTCG CGGCCGCGAT CGGCAGGCGC
CCCGGCCTGC TGCTCGCGCG CGACGCGAAC GGCCGCCAAC GCGCGACGGT CGTGCGCAAT
CTCGCGACGG CGATCACGCT GACCGACGCG CAAGGCAGTG CGATCGCGGT CCAGACGCTG
AACCGGCCGA TCCTCGGCAC GGTCGTCAAT TGCGGCGCGC AGGCGCGCAC GCCGACGAGC
GAGCCGGCGC AGGACACGGT GTGCACGAAC TACGATGACC TCGTGATGTA CGACTCGCTA
TATCTGCGCG GCGGTGCGTC GAACACGCTC GTCGACGCCG GCTACCAGGG CGCGCGATAC
GAACTCGTGG TCGACGCGAA CGGCGCCGTC GTCGCCGGCC ATGCGACGCT CGGCGCGCCG
CCGCCGCCGA ACGGCTACGT GCTGCAGGGG CTCGGCGCGA GCGCCGCGTG GCTGCAGGCG
CATGCGACGC CGGGCACGCG CCTCGCGGTA TCGCGCCGGC TGTCGGCCGA CGGCGCGGAT
CTCGCGCTCG CGTCGGGCAC GTCGCTCGTC GAGGCGGGGC CGACGCTGTC CGTGCCGAAT
CTCGCGCAAA GCGCCGCGCA AGAGGGCTTC GCGCCGACGG TGGGCGGCGT CGACGCGGGC
GAAGGCGCCG CGGCGAACGG CAACTGGTAC AACGGCTGGT ATGTCGCGCG CAATGGGCGC
ACCGCGGCGG GCGTCGCGGC GGACGGCACG ATCCTGCTCG TCGAGATCGA CGGCCGGCAG
CCCGCGTTGA GCGTCGGCAC GAGCATTCCG GAGACGGCGG CGGTGATGGC ATGGCTCGGT
GCGACGTCGG CCGTCAATCT CGACGGCGGC GGCTCGAGCA ACATGGTGGT CGGCGGCAAG
ATGGTCGGAC ATCCGTCCGA CGCGGTGGGC GAGCGGGGCG TCGGCGATAC GCTGATGCTG
CTGCCGGGCT GA
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| Protein sequence | MRTTKSPGIS VIRQRLAVAL PLALTLTLAS CGGDDLTPAA QRWAMPGTEL PLGPQGLAQS
VSTQTLAAGV AYYQIKRGAA SAADFWTVNL GFYATQAAAQ ADAANLAAAG FATRVDASAG
TDLQGKVLGY WLSAGRYATQ AEATAAAARI AQATQNRYKP GTRHTSLAGA PTTGPWIVNV
LAIDPSRAGA ALSLALPGGN DLGAGGETVS AARARVNALA GVNGGFFTNI NPFGAPLPPR
SPVGATVVDG RLVAAAIGRR PGLLLARDAN GRQRATVVRN LATAITLTDA QGSAIAVQTL
NRPILGTVVN CGAQARTPTS EPAQDTVCTN YDDLVMYDSL YLRGGASNTL VDAGYQGARY
ELVVDANGAV VAGHATLGAP PPPNGYVLQG LGASAAWLQA HATPGTRLAV SRRLSADGAD
LALASGTSLV EAGPTLSVPN LAQSAAQEGF APTVGGVDAG EGAAANGNWY NGWYVARNGR
TAAGVAADGT ILLVEIDGRQ PALSVGTSIP ETAAVMAWLG ATSAVNLDGG GSSNMVVGGK
MVGHPSDAVG ERGVGDTLML LPG
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