Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A2828 |
Symbol | |
ID | 4903854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 2768285 |
End bp | 2770489 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640145931 |
Product | Rhs element Vgr protein |
Protein accession | YP_001076857 |
Protein GI | 126456235 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCCGCG TGTTCACACT CGACAGCCTG CACGGCGACG ACCTGAAGTT CCACCGGCTC TACGGCGAGG AAGCGCTCGG GCGGATGTTC GACTTCCGGA TCGAAGCGCT CGCCGACAAT CACAGCCTGT CGCTGAAGGA ACTGCTCGGC AAGCCGGTGA CGGTGCGCAT CCGGCAGCAG GACGAATCGG AGCGCCATCT GAACGGGATC GTCGCGCGCG CCGCGCTGGT CGGGCGGCGC GCGGAGCGGC ATTACGGCTA TCAACTGATC GTGCGGCCGT GGCTGTGGCT CGCGACGCGC CGCTCCGATT GCCGGATCTT CCAGAACAAG ACGGTGCCGG AGATCGTGCA GGACGTGCTC GGCACGTACG GCTTTCCGAT CGAAAACCAT CTGACCGACA CGTACGCGCC GCGCGACTAC TGCGTGCAGT ACAACGAGAC CGACGCGGCG TTCGTGTCGC GGCTGATGGA GTTCGAAGGG ATCTACTACT ACTTCAAGCA CGCCGCGCAA ACGCACACGC TGATGCTGTG CGACGCGATG GCGTCGCACG TCGCGCTGCC GGGCTACGAG CACATTCCGT TCATCGCGCG CGACCGCACC GCGATCGCCG ACGAAGAGCA CATCGACAGC TGGCTGCCCG CGCAGGAAGT GAGCATCGGC AAGCACGAGA CGAGCGACTA CGACTACACG AAGCCGCGCG CGGATCTGTC CGCGCAGAAG ATCGATCCGC GCGGCCACGA CCATGACGGC TTCGCGTCGT TCGAATGGCC CGGCGGCTAT CGCGACGATG AACCGGGCGC GCATTACAGC CGCGTGCGGC TCGAAGAGCA GCAGGCGGAG CACGAACGCG CGCTCGCGCG CACCGACGTG CGCGGCATCG CACCCGGCTA TCTGTTCACG CTCGAACACT GCCCGCGCGC CGACCAGAAC CGCGAATACC TGATCGTGCG CTGCCAGTAT CGGTTTCAGG AGAACGCGTA CGCGACCGAT AGCGGCAACG AGGCGGTCGT GCACGAATCT CAGACACTCG TGCAGCCTTC GAGCCTGCCG TATCGCTCGC CGCGCGCGAC GCCGCGGCCG CGCACGAACG GCCCGCAGAC GGCGACCGTC GTCGGCCCGA AGGGCGAGGA AATCTGGACG GACCAGTACG GGCGCGTGAA GCTGCAATTT CGCTGGGACC GCTACGGGCA GAGCGACCAG AACTCGTCGT GCTGGGTGCG CGTGTCGAGC CCGTGGGCGG GCGGCGGCTT CGGCGGCGTG CAGATCCCGC GCATCGGCGA TGAGGTGGTG GTCGATTTCC TGAACGGCGA CCCCGATCAG CCGATCGTGA CGGGGCGCGT GTACAACGGC GAGAAGATGC CGCCATGGGG GCTGCCCGGC AGCGCGACAC AAAGCGGGCT GCTGTCGCGC TCGTCGCCGG GCGGCACGGC CGAGCATTCG AACGCGTTTC GCTTCGAGGA CAAGAAGGGC GCGGAGCAGC TGTGGATGCA TGCGGAGCGC AACTTCGACG CGGAGACCGA GCAGGACCAC ACGCTGTCGG TGGGCCACGA TCATTCGCAT TCGGTCGGCA ACAACGAGAT GATGAGCGTC GCGAACGACC GGCAAAGGAG CGTCGGGCAG AACGAGACGG TGAACATCGG GAAACATCGC GTCGCGCAGA TCGGCGGGAA CGAGACGCAT GGCGTCGCGG GAAACCGCAC GCGGCAGGTC GGACAGAACG AAGCCGTGAC GATCGGCGCG AATCGCGAGG CGACGATCGG CGGCAATCAC GTGGAGACGG TCGCGAAAGA CAAGACCGAA ACGATCGGGC AGGGCAAGAC GCTGAATGTC ACTCAGCACT ATCAGACGAC TTCGAAGAGC ATGAAGACCG CTGTCGCCGA ACATCACGCC GAGGAGATCG GCTCGCGAAC GTCGACGATC GAGAAAGCGC ACGAGCTCAA CGTTGGCGGT TCTCAATCGG TGAACGTTGG CGCGAGCCAC ACGATGAGCG TGAAGAACAA CGTACATGTC GGCGCGGGCG ATCAGATCTC GCTCGTTTGC GGCGATGCGA GCATCACGCT GAAGAAGGAC GGCACGATAG CGATCAACGG CGTCACGGTG GAATCGAGCG CCAGCGGAAG CCATAGCGTG CGCGGCAAGA CAGTGACGTC GTCGGCGACG GGCGAGCACA CGGTGGAAGG CACGATACTG AAACTGAACC CCTGA
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Protein sequence | MTRVFTLDSL HGDDLKFHRL YGEEALGRMF DFRIEALADN HSLSLKELLG KPVTVRIRQQ DESERHLNGI VARAALVGRR AERHYGYQLI VRPWLWLATR RSDCRIFQNK TVPEIVQDVL GTYGFPIENH LTDTYAPRDY CVQYNETDAA FVSRLMEFEG IYYYFKHAAQ THTLMLCDAM ASHVALPGYE HIPFIARDRT AIADEEHIDS WLPAQEVSIG KHETSDYDYT KPRADLSAQK IDPRGHDHDG FASFEWPGGY RDDEPGAHYS RVRLEEQQAE HERALARTDV RGIAPGYLFT LEHCPRADQN REYLIVRCQY RFQENAYATD SGNEAVVHES QTLVQPSSLP YRSPRATPRP RTNGPQTATV VGPKGEEIWT DQYGRVKLQF RWDRYGQSDQ NSSCWVRVSS PWAGGGFGGV QIPRIGDEVV VDFLNGDPDQ PIVTGRVYNG EKMPPWGLPG SATQSGLLSR SSPGGTAEHS NAFRFEDKKG AEQLWMHAER NFDAETEQDH TLSVGHDHSH SVGNNEMMSV ANDRQRSVGQ NETVNIGKHR VAQIGGNETH GVAGNRTRQV GQNEAVTIGA NREATIGGNH VETVAKDKTE TIGQGKTLNV TQHYQTTSKS MKTAVAEHHA EEIGSRTSTI EKAHELNVGG SQSVNVGASH TMSVKNNVHV GAGDQISLVC GDASITLKKD GTIAINGVTV ESSASGSHSV RGKTVTSSAT GEHTVEGTIL KLNP
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