Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A2689 |
Symbol | |
ID | 4906278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 2627626 |
End bp | 2629989 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640145792 |
Product | chain length determinant family protein |
Protein accession | YP_001076719 |
Protein GI | 126458233 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTGA AAGCACAACC GATTCCGGCG GCCCCGCACG CCAAGCGAAA CGACGGGCTC GCGAGCCTAG GGTGGAGCGT CGTGCGGCAC CGGCGGCTCT TCGCGACGAT CGTCGGCGTG TTCTTCGCGC TGGGCGTCCT GTACGCGCTC CTCGCCACGC CGCAGTATCG CGCCGAGGCG CTGCTGCGAA TCCAGACGAA GCCCGGAGCG TCGATCAGCG CGCTGTCGGA CGTGTCCGGC ACGATCTCGA ACGGCCCTTC CGCGAACGAC GAGAGCGAAG TGCTGACATC GCGCGCGATC GTCGGCGCGG CGATCGAGCA GATCGGCGCG AACCTCGAGA TCCGCACGCT CGACCATTTC CCGCTCATCG GCCGCCTGCT CGCGTCCGGC CACGCGAACG ACGACAAGCT CGCGTCGCCG CTGCTCGGCC TGTCCGGCTT CGCGTGGGGC GGCGAAAAGC TCAAGCTCGG CGAATTCTCG TTGCCGGACG CCGCGCTCGG CGAGAAGTTT CGGCTCGTCG CGGGCGATGA CGGCCAATGG TCGCTCTACG ACAAGAAGGA CCGCCTGCTC GCGCGCGGCG CGCTCGGCGA GAGCGTGCCG TTCGCCGTGG CTCTCGACGG CGAACGCGCG CAGCCGGGCC GCATTCGCGT CGACACGCTG CGCGCGCGCT CGGGCATCGC GTTCTCGATC GTCAAGGAAC CGACGCAGCT CGTCTACGAC GACGTGATGA AAAAGATGAA GACGGTCGTG TCCAATCGCG ATTCGACGCT CGAGGAGCCG TCGATGATGA AGCTCGTCTA TCAGGCCGAC ACGCCGCAGC GCGTGCAGGA AATGGTCAAC GCGATCGTGC GCGTCTATCT GGACCAGGAC ATCAAGTATC GCGCGGAGAA AGCGCAGCGT AATCTCGACT CGCTGCACGC GCGACTGCCG GGCCTGAAGA AAGACCTCGA AAAAGCGGAG GACGCGCTGA ACCGCTACCG CACGACGACG GGCACGATCG ATGTCGACCA GCAAGGCATC GCGCTCATCA ACCGGCTGAA CTCGCTGTCC GAGCATCAGA CCGTGCTGCA GCTCGCGCTC GACAACGTGA AGGCGCGCTT CCTGCCCGGC AGCACCACGT ATCAGACCGT GCAGACGCAG CTCGATCAAG TGAAGAAGGA GATTCAGCAA ACGACGACGG CGGCCAACAA ACTGCCGACC GCGCAGCGGG AATTCGTTCG CCTGTCGCGG CAGGTATCGG TCGCGACGCA GCTCTACACG AGCGTGCTGA CCAACGCACA GCAGCTCGAG ATCGCCGTGG CCAGCACGAC GCCGGGCGTG AGCGTCGTCG ACTGGGCGAA CAAGCCATAC AAGAAGGCAT GGCCGCAGCG CGGCATCGTG GTGCTCGGCG CGCTGCTCGG CGGGCTCTTC GCGGGGCTCG CCGCCGCCTA CCTGCTCGCG CGCCATCGCG ACGAGCTGAG CGGCCCGCAA TCGATCGCGG ACGTGTCGGA CATTCCGTGC GTGGCCGTCG TCGCGCCATC CGCGGAATCG CTCGCGCTCG GCGACGATCG CCCCGGCAAC GCGCGCGCGA GGGTCAAGCC GCTCGCCGCG CAACGGCCGA ACGATCCGGG CATCGAAGCG CTACGCGCGC TGCGCACGAG CCTGCGCGCC GCGCTCGCGC ACGAAGGCCG CGGCGGCGGC AAGGTGCTCG TGTTCGCCGG CCCGACGGCG CGCGTCGGCG GCAGCTTCGT CGCATCGAAT CTCGCCTATC TGTTCGCCGA CTCGAATGCA TCGGTGCTCT TTGTCGACGC CGACATGCGC GGCGGCTCGC ACAACCCGCT CGGCGTAGGC CGCAACGGCG GCGCGATCGG TCTCGCGAAC GTGCTCGAGG GCGGACAGCC GCTCGAGAAG GCGATCGTCA AGCTCGGCAA GGGCAAGCTC TCGGTGATGA CGCCCGGTAC GCTGACCGGC TCGAATCCGG GCGAACTGTT CGAACGCGCG GAATTTCCGC AGTTGCTCGC GGCGCTGCGC ACGCGCTACG ACTTCGTGAT CGTCGACGCG CCGCCCATTC TTCCGTACAG CGACACGCTG TCGATCGCCG CGCAGGACTG CGACGCGCTG CTGCTCGTAT CGCGCGGCAG GACGACGCGC GCGTCGGAGC TCGAAACGGC GTTGCAGCGC CTCGACAGCG TCGGCGCGAA AATCGCCGGC CACGTCTTCA ACGCATATGT CGCGCCGCCG CGCCCGCCCC GCACCTCGCT GCGCGACGAT TGGCGCGAAA TCGTCGCGCG CTGGATGAAA CCTCGCCGCC CCGCCCGGCC GGCGCAGGCG AAGCAGACGT TCAGGCTGGC GAAGGGCATG GCCGCGAAGG CCTCCCGGAA CTGA
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Protein sequence | MDLKAQPIPA APHAKRNDGL ASLGWSVVRH RRLFATIVGV FFALGVLYAL LATPQYRAEA LLRIQTKPGA SISALSDVSG TISNGPSAND ESEVLTSRAI VGAAIEQIGA NLEIRTLDHF PLIGRLLASG HANDDKLASP LLGLSGFAWG GEKLKLGEFS LPDAALGEKF RLVAGDDGQW SLYDKKDRLL ARGALGESVP FAVALDGERA QPGRIRVDTL RARSGIAFSI VKEPTQLVYD DVMKKMKTVV SNRDSTLEEP SMMKLVYQAD TPQRVQEMVN AIVRVYLDQD IKYRAEKAQR NLDSLHARLP GLKKDLEKAE DALNRYRTTT GTIDVDQQGI ALINRLNSLS EHQTVLQLAL DNVKARFLPG STTYQTVQTQ LDQVKKEIQQ TTTAANKLPT AQREFVRLSR QVSVATQLYT SVLTNAQQLE IAVASTTPGV SVVDWANKPY KKAWPQRGIV VLGALLGGLF AGLAAAYLLA RHRDELSGPQ SIADVSDIPC VAVVAPSAES LALGDDRPGN ARARVKPLAA QRPNDPGIEA LRALRTSLRA ALAHEGRGGG KVLVFAGPTA RVGGSFVASN LAYLFADSNA SVLFVDADMR GGSHNPLGVG RNGGAIGLAN VLEGGQPLEK AIVKLGKGKL SVMTPGTLTG SNPGELFERA EFPQLLAALR TRYDFVIVDA PPILPYSDTL SIAAQDCDAL LLVSRGRTTR ASELETALQR LDSVGAKIAG HVFNAYVAPP RPPRTSLRDD WREIVARWMK PRRPARPAQA KQTFRLAKGM AAKASRN
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