| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2614 |
|---|
| Symbol | |
|---|
| ID | 4904214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 2555978 |
|---|
| End bp | 2556856 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640145717 |
|---|
| Product | decarboxylase family protein |
|---|
| Protein accession | YP_001076644 |
|---|
| Protein GI | 126457471 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
|---|
| TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.672113 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCGA CGCCGCGCCG CACGCGCACC GCGCCGAAGC GCCGCGCGCC ACTGTCGAGC
ACCGTCGAGC GGCTCGTATC GAGCCCGACG TATCGGCAGG CCGACGAGGA TCTCGCGTTC
CTGCAGCGCC CCGAAATGTG CGGCGTGCGC TTGCAGCTCG ACTACTGGAA GACCGAGGAA
ACGCTGCAAC GCTTCGGCAT CTGCGATACG GTGGTGGTCT ACGGCAGCAC GCGGATCGCG
TCGCCCGCCG TCGCGCGCGC GAGGCTCGCC GACGCGCAGC ACCGGCTCGC CGAGCGTCCG
AACGACCCCG AGCGCCGCCA TGCGGTCAGC GTCGCGGTGC GGCTGCTCGA GCGCAGCCAC
TACTACGGCG TCGCGCGCGA TCTCGGCCGG CTCGTCGGCG AAACCGGCCG CTCGCCGCAT
CCTCGGCGCC TCACGATCAT CACGGGCGGC GGTCCGGGCA TCATGGAGGC GGCCAATCGC
GGCGCGCACG AGCGGGGCGC GCCGAGCATC GGGCTCAACA TCACGCTGCC GCGCGAGCAA
TTCCCGAATC CCTACGTGAC GCCCGAGCTG TGTTTTCGCT TCCATTACTT CGCGATCCGC
AAGCTGCACC TGCTCGAACG CGCGAAGGCC GCGGTGTTCT TTCCCGGCGG CTACGGCACC
TGCGACGAGC TGTTCGAAGT GCTGACGCTG TTGCAGACCC GCAAGATCGC GCCGCTGCCC
GTCGTGCTCG TCGGCCGCGC GTTCTGGCGC TCGGCGGTCG ATTTCGGGTT TCTCGTCGAC
GAAGGCATGA TCGACCCGTG CGACGCAGCG CTGTTCCGGT TCTGCGAAAC CGCCGACGAG
ATCTGGGCCG CGATCGGCGG CCCGCACGGG CCGGCCTAG
|
|---|
| Protein sequence | MRPTPRRTRT APKRRAPLSS TVERLVSSPT YRQADEDLAF LQRPEMCGVR LQLDYWKTEE
TLQRFGICDT VVVYGSTRIA SPAVARARLA DAQHRLAERP NDPERRHAVS VAVRLLERSH
YYGVARDLGR LVGETGRSPH PRRLTIITGG GPGIMEAANR GAHERGAPSI GLNITLPREQ
FPNPYVTPEL CFRFHYFAIR KLHLLERAKA AVFFPGGYGT CDELFEVLTL LQTRKIAPLP
VVLVGRAFWR SAVDFGFLVD EGMIDPCDAA LFRFCETADE IWAAIGGPHG PA
|
|---|
| |