Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A2425 |
Symbol | |
ID | 4905641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 2396551 |
End bp | 2397699 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640145529 |
Product | PHB depolymerase family esterase |
Protein accession | YP_001076456 |
Protein GI | 126456391 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCAAAA GTCTGACGAA ATTCTGGCTG GGCGGTGTGA AACGCATGCT GCACATGCCG AACGCGCGGA CGTCGGCGTC CGCCCTGAAG GCTGCCCAAA AGATGACGGC CGACTGGCCG TTCGCCGAAA CGATGGCCGC GGCGGCGGCC GCTTCAGTCG CCTCCGTCGC GGCGTCCGCC GACACGGTAC CGCCCGCCGC GCGCGAATCG CGCGTGCGGC CGCGCGCGGC CGCTTGGGCG GGCGGCGAAT GGATCCGCGC CGATCACCCG TTGCCGCCCG CGTTCGGGCG CTTCGTCAAG CATCTCGAAT ACGGGCTGTA CGTGCCGTCC GGCGCGAAGA CGCTCGGTTT GCCGCTCGTC GTGATGCTGC ACGGCTGCAA GCAGGACATG AATCAGTTCT CGCAAGGCAC GCGGATGAAC TTGCTCGCGG ACCGATACGG CTTCGCCGTG CTCTACCCGG AGCAGTCGCT CAGCGCGCAC GCGCACGGCT GCTGGCACTG GTACGAGGAC ACCGTGCACG GCGGGCGCGG CGAAGCGCAG GCGGTCGTCG CGCTCGTCGA CGCGCTCGTC GCCGAGCGCG GCTTCGACGC ATCGCGCGTG TATGCGGCCG GCATGTCGGC GGGCGCGGGG CTCGTATCGT TGCTCGCGCT GCATTTCCCG CGGCGCTTCG CGGCCGTGGC GCTCCATTCG GGGCCGGCGT TCGGCGATGC GCATTCCGGG ATCACCGCGA TGGACGTGAT GCGCCGCGGC CTGCACCGCG ATCCCGCCGC CGTTGTCGAC GCGCTCGTCG AGCCGGGCGC GCATCCGGGA ATGCCGGCCT TCATCGTGCA CGGCGACGAC GATCGCGTTG TCGTGCCGAA GAACGCGGAC GAACTCGCCG TTCAGTTCCT GCGGCTGAAC GGTCTTGCCG ACGCCGATGG TGAACCGGCG GGCGTCGAGC GTTTCGAGAC GCGCGCAGCC GACGTGCGCA CGCTCGACTA TCGCCGCGAC GGCGAATCGG TCGTGCGCCT CTGCCGGGTC CACGGCCTCG CGCATGCGTG GGCGGGCGGC GACGACAGTG TGCCGTTCCA CTCGGCCGCC GGCCCGGATG CGAGCGAGCT GATCTGGTCT TTCTTCGCGT CGCGTGAGCG AGCGGCTGTC GCGTCGTAA
|
Protein sequence | MTKSLTKFWL GGVKRMLHMP NARTSASALK AAQKMTADWP FAETMAAAAA ASVASVAASA DTVPPAARES RVRPRAAAWA GGEWIRADHP LPPAFGRFVK HLEYGLYVPS GAKTLGLPLV VMLHGCKQDM NQFSQGTRMN LLADRYGFAV LYPEQSLSAH AHGCWHWYED TVHGGRGEAQ AVVALVDALV AERGFDASRV YAAGMSAGAG LVSLLALHFP RRFAAVALHS GPAFGDAHSG ITAMDVMRRG LHRDPAAVVD ALVEPGAHPG MPAFIVHGDD DRVVVPKNAD ELAVQFLRLN GLADADGEPA GVERFETRAA DVRTLDYRRD GESVVRLCRV HGLAHAWAGG DDSVPFHSAA GPDASELIWS FFASRERAAV AS
|
| |