Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A2392 |
Symbol | dxs |
ID | 4904450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 2368637 |
End bp | 2370541 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640145497 |
Product | 1-deoxy-D-xylulose-5-phosphate synthase |
Protein accession | YP_001076424 |
Protein GI | 126456504 |
COG category | [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism |
COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGACT TGCTGAAAAC CATCGACGAT CCGGCGGACC TGCGCCGTCT CGATCGTCGC CAACTGCAGC CGCTCGCCGA CGAGCTGCGC GCGTTCGTCC TCGACAGCGT GTCGAAGACG GGCGGCCATT TGTCGTCCAA TCTCGGCACG GTCGAGCTGA CGATCGCGCT GCATTACGTG TTCAATACGC CGGACGACCG GATCGTGTGG GACGTCGGTC ACCAGACCTA TCCGCACAAG ATCCTGACGG GCCGCCGCGA CGGGATGAAG ACGCTGCGCC AGTTCGACGG CATCTCGGGC TTTCCGCGCC GCTCGGAATC CGAATACGAC ACGTTCGGCA CCGCACACTC GAGCACGTCG ATCTCGGCCG CGCTCGGGAT GGCGATCGGC AGCAAGCTGA ACGGCGACGA CCGCTTCTCG ATCGCGGTGA TCGGCGACGG CGCGATGACG GCCGGCATGG CGTTCGAGGC GATGAACAAC GCGGGCGTGT CGGAGGACGC GAAGCTGCTC GTGATCCTGA ACGACAACGA CATGTCGATC TCGCCGCCCG TCGGCGCGCT GAATCGCCAT CTCGCGCGCC TGATGTCGGG CCGCTTCTAC GCGGCCGCGC GTGCGGGCGT GGAGCGCGTG CTGAGCGTCG CGCCGCCCGT GCTGGAGCTC GCGCGCAAGC TCGAGGAGCA TGCGAAGGGC ATGGTCGTGC CGGCCACCCT CTTCGAGGAA TTCGGCTTCA ACTACATCGG GCCGATCGAC GGCCACGATC TCGATTCGCT GATCCCGACG CTGCAGAACA TCAAGGAGCT GCGCGGGCCG CAGTTCCTGC ACGTCGTGAC GAAGAAGGGC CAGGGCTACA AGCTCGCCGA GGCCGACCCG GTGCTCTATC ACGGGCCCGG CAAGTTCAAC CCGGCGGAAG GCATCAAACC GTCGACGACG CCCGCGAAGA AGACCTACAC GCAAGTGTTC GGCGAATGGC TGTGCGACGC GGCGGAACTC GATGCGCGCG TGGTCGGCAT CACGCCCGCG ATGCGCGAAG GCTCGGGCAT GGTCGAGTTC GAGAAGCGCT TCCCGGAGCG CTACTACGAC GTCGGCATCG CCGAGCAGCA CGCGGTGACG TTCGCGGGCG GCCTCGCGAC GGAAGGGCTC AAGCCTGTCG TGGCGATCTA TTCGACGTTC CTGCAGCGCG CTTATGATCA GCTGATTCAC GACGTCGCGC TGCAGAACCT GCCCGTCGTG TTCGCGATCG ACCGCGCGGG CCTCGTCGGC GCGGACGGCG CGACGCACGC GGGCGCGTAC GATCTCGCGT TCCTGCGCTG CATTCCGAAC ATGACGGTGA TGGCCGCGTC GGACGAGAAC GAGTGCCGCC AGATGCTGCA TACCGCGCTG CAACAGCCGA ACCCGACCGC CGTGCGTTAT CCGCGCGGCG CGGGCACGGG CGTTGCCACC GTCAAGGCGT TTACCGAGAT CCCGCTCGGC AAGGGCGAAG TGCGCCGCCG CACGTCGCAG CCGGACGGCA AGCGCATCGC GATTCTCGCG TTCGGCACGA TGGTGGCGCC GTCGCTCGCG GCGGCCGACG CGCTTGACGC GACCGTCGCG AACATGCGCT TCGTGAAGCC GATCGACGCC GAGCTCGTGC AAGCGCTCGC GCGGACGCAC GACTACCTCG TCACCGTCGA GGAAGGCTGC GTGATGGGCG GCGCGGGTTC CGCATGCGTC GAGGCGATGA TGGAAAGCGG CGCCGTCCGC CCGGTGTTGC AGCTCGGCTT GCCGGACCGT TTCGTCGATC ACGGCGATCC GGCGAAGCTG CTGTCGCTGT GCGGCCTCGA CGGCGACGGC ATCGCCAAAT CGATTCGCGA ACGCTTCCTG AGCCACGCGG CTGACGTCGC GAGCCCGGCG AAGCGCGTCG CATAA
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Protein sequence | MYDLLKTIDD PADLRRLDRR QLQPLADELR AFVLDSVSKT GGHLSSNLGT VELTIALHYV FNTPDDRIVW DVGHQTYPHK ILTGRRDGMK TLRQFDGISG FPRRSESEYD TFGTAHSSTS ISAALGMAIG SKLNGDDRFS IAVIGDGAMT AGMAFEAMNN AGVSEDAKLL VILNDNDMSI SPPVGALNRH LARLMSGRFY AAARAGVERV LSVAPPVLEL ARKLEEHAKG MVVPATLFEE FGFNYIGPID GHDLDSLIPT LQNIKELRGP QFLHVVTKKG QGYKLAEADP VLYHGPGKFN PAEGIKPSTT PAKKTYTQVF GEWLCDAAEL DARVVGITPA MREGSGMVEF EKRFPERYYD VGIAEQHAVT FAGGLATEGL KPVVAIYSTF LQRAYDQLIH DVALQNLPVV FAIDRAGLVG ADGATHAGAY DLAFLRCIPN MTVMAASDEN ECRQMLHTAL QQPNPTAVRY PRGAGTGVAT VKAFTEIPLG KGEVRRRTSQ PDGKRIAILA FGTMVAPSLA AADALDATVA NMRFVKPIDA ELVQALARTH DYLVTVEEGC VMGGAGSACV EAMMESGAVR PVLQLGLPDR FVDHGDPAKL LSLCGLDGDG IAKSIRERFL SHAADVASPA KRVA
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