Gene BURPS1106A_A2363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A2363 
Symbol 
ID4904594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand- 
Start bp2338949 
End bp2340049 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content66% 
IMG OID640145468 
Productpolyamine ABC transporter, ATP-binding protein 
Protein accessionYP_001076396 
Protein GI126456265 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.299534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACCG ATGATGTGAT CGTCAGCTTT CGCGGCGTGC GCAAGACTTA CGACGGCGAG 
ACGCTCGTCG TCAAGGCGCT GGATCTGGAT ATCCGGCGCG GCGAATTCCT GACGCTGCTC 
GGGCCGTCCG GCTCAGGCAA GACCACTTGC CTGATGATGC TCGCGGGCTT CGAATTCCCG 
ACGGGCGGCG AGATTCGCCT GGACGGCGAA CTGCTGAACA ACGTGCCGCC GCACAAGCGC 
AACATCGGCA TGGTGTTTCA AAACTATGCG CTCTTTCCCC ATCTGAGCGT CGAGCAGAAC 
GTCGACTATC CGCTGAACGT GCGGCGGATG CCCGCCGCGG AACGCGCCGC GCGCGTCGCG 
GCGGCGCTGG CGATGGTGCA GATGGAGCGC TTCGCGAAGC GCTATCCGGC GCAACTCTCG 
GGCGGGCAGC AGCAGCGCAT CGCGCTCGCG CGCGCACTCG TGTTCGAGCC GAAGCTCGTG 
CTGATGGACG AGCCGCTCGG CGCGCTCGAC AAGCAGTTGC GCGAACACAT GCAGTACGAA 
CTGAAGGCGT TGCACGAAAA GCTCGGCCTG ACCTTCGTCT ACGTGACGCA CGATCAGGGC 
GAGGCGCTGA CGATGTCCGA TCGCGTCGCG GTGTTCGACA AGGGCATCGT GCAACAGCTC 
GACACCGTCG ATCGGCTGTA CGAATCACCG TGCAACGAGT TCGTCGCGAA TTTCATCGGC 
GACAGCAATC GGTTACGCGG CACCGTCGCG AGCGTGCACG GCGAGTTTTG CGAATTCCGG 
CTCGAAGACG GCACGCGCCT CGTCGGCCTG AACGCGGGCA ACGCGCAAGC GGGCGCGTCG 
GGCGTCGCCT GCATTCGTCC CGAGCGGATG AGCGTCGCGC CGGGCAGCGG CCGCGCGGCG 
AACGGCGCGG CGAACGCGCT AGCCGGCGAA GCGCGCAGCC TCATCTACTT CGGCGATCAC 
GTGCGGATGC GCTGCGCGTT GCCGGGGCAG GACGAATGCT TCGTCAAGGT GCCGCTCGGC 
ACCGGCGCGC TCGATGCGTT CGCGCCCGGC GTGCCGATCT CGCTCGAGTT CCAGCCCGAG 
CATCTGCGGG TCTTCGCATG A
 
Protein sequence
MKTDDVIVSF RGVRKTYDGE TLVVKALDLD IRRGEFLTLL GPSGSGKTTC LMMLAGFEFP 
TGGEIRLDGE LLNNVPPHKR NIGMVFQNYA LFPHLSVEQN VDYPLNVRRM PAAERAARVA 
AALAMVQMER FAKRYPAQLS GGQQQRIALA RALVFEPKLV LMDEPLGALD KQLREHMQYE 
LKALHEKLGL TFVYVTHDQG EALTMSDRVA VFDKGIVQQL DTVDRLYESP CNEFVANFIG 
DSNRLRGTVA SVHGEFCEFR LEDGTRLVGL NAGNAQAGAS GVACIRPERM SVAPGSGRAA 
NGAANALAGE ARSLIYFGDH VRMRCALPGQ DECFVKVPLG TGALDAFAPG VPISLEFQPE 
HLRVFA