Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A2331 |
Symbol | sdhB |
ID | 4906232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 2308694 |
End bp | 2309395 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640145436 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | YP_001076364 |
Protein GI | 126455690 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAAC GCATTTTCGA AATCTACCGC TACGATCCGG ACAAGGACGC CGCGCCGCGC ATGCAGACGT ACGAGCTGGA GATCCAGCAC GAGCGGATGC TGCTCGATGC GCTCGTCAAG CTGAAGTCGG TCGACGAGAC GCTGTCGTTC CGCCGCTCGT GCCGCGAAGG CGTGTGCGGC TCGGACGCGA TGAACATCAA CGGCAAGAAC GGCCTCGCGT GCCTGACGAA CCTGAACGAC CTGCCGCAGA AGATCGTGCT GCGTCCGCTG CCGGGCCTGC CTGTCGTGCG CGATCTGATC TGCGACTTCA CGCAGTTCTT TAACCAGTAC CACTCGATCC GCCCGTACCT GATCAACGAC GAGCCGCCGC CCGAGAAGGA GCGTCTGCAA TCGCCGGAAG AGCGTGACGA GCTCGACGGC CTGTACGAGT GCATTCTGTG CGCGAGCTGC TCGACGTCGT GCCCGAGCTT CTGGTGGAAT CCGGACAAGT TCGTCGGCCC GGCGGGCCTG CTGCAGGCGT ATCGCTTCAT CGCGGACAGC CGCGATCGCG CGACGGGCGA GCGCCTCGAC AACCTCGACG ATCCGTATCG CCTGTTCCGC TGCCACACGA TCATGAACTG CGTCGACGTG TGCCCGAAGG GCCTGAACCC GACGAAGGCG ATCGGCAAGA TCAAGGAATT GATGGTTCGT CGCGCGGTCT GA
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Protein sequence | MAKRIFEIYR YDPDKDAAPR MQTYELEIQH ERMLLDALVK LKSVDETLSF RRSCREGVCG SDAMNINGKN GLACLTNLND LPQKIVLRPL PGLPVVRDLI CDFTQFFNQY HSIRPYLIND EPPPEKERLQ SPEERDELDG LYECILCASC STSCPSFWWN PDKFVGPAGL LQAYRFIADS RDRATGERLD NLDDPYRLFR CHTIMNCVDV CPKGLNPTKA IGKIKELMVR RAV
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