Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A2254 |
Symbol | selB |
ID | 4905143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 2235226 |
End bp | 2237181 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640145359 |
Product | translation elongation factor, selenocysteine-specific |
Protein accession | YP_001076287 |
Protein GI | 126455898 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00475] selenocysteine-specific elongation factor SelB [TIGR00485] translation elongation factor TU |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0142669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCGCAG GCGCCGACGG GCCCGCGCGC ATGATCGTCG GGACCGCAGG CCACATCGAT CACGGCAAGA CGACGCTCGT GCGCGCGCTG ACGGGCGTCG ACACCGATCG GCTGAAGGAA GAGAAGGCGC GCGGAATCTC GATCGAGCTC GGCTACGCGT ACACGCCGCT GCCGAACGGC GACGTGCTCG GCTTCATCGA CGTGCCCGGC CATGAAAAGC TCGTCCACAC GATGGCCGCG GGCGCGTGCG GGATCGACTT CGCGCTCGTC GTGATCGCGG CCGACGACGG CGTGATGCCG CAGACCCGCG AACATCTGTC GATTCTGCAA CTGCTGGGCG TCGCGCATGG CGCGCTCGCG CTGACGAAAT GCGATCGCGT CGACGCGGCG CGGGTCGCGC GGGTGCGCGA CGAGATCCGC GCGTGGCTCG CGGCCTCACC GCTCGCCGAT GCGCCGGTTT TCGAGACGCG CGCGAGCGAG CCGGACGACG CGGGCGTCGC CGCATTGAAC GCGCACCTGC GCGACACGGC GCTCGCCTGG CGCGCGCGGC GCGACGACGG CCTGTTCCGG CTCGCGGTCG ATCGCGTGTT CACGCTCGCG GGGCAAGGCA CCGTCGTGAC GGGCACCGCG GTCGCGGGGC GCGTGCGCAC GGGCGACTCG CTCGCCGTCG CGCGCACGGG CGAAACGGTG CGCGTGCGCA GCATCCATGC GCAGAACCGC GCGACCGACG TCGGCCATGC GGGCGAGCGC TGCGCGCTGA ATCTCGCGGG CATCGACAAG GCGGCGCTCG CGCGCGGCGA TGCGATCGTC GACGCGCGGC TCGCGACGCT TTCGCCACGC ATCGACGTCG AATTGACGTT GACGGCGGAC GCCGACCTGA CGATCACGCA CTGGACGCCG CTGCACGTGC ATCTCGGCAC GCTGCACCGG GTCGCGCACG TTGCGCTGCT CGAAGGCGAG ACGCTCGGGC CCGGCCGGCG CGCCCGCGCG CAGTTGAATT TCACGGAGCC GGTGTTCGCC GCGCCGGGCG ATCGCTTCAT CGTGCGCGAC GCGCAGGCGA CGCGCACCGT GGGCGGCGGG CGCGTGCTCG ATCCGTTCGG CCCCGCGCGC AAGCGGCGCA CGCGCGCGCG ACGCGCGTGG CTCGACGCGC TCGCGGCGTG GCTCGACGAA GGCCGTCTCG ACGCGTTGCT CGACGAGGCG CCGCTCGGCA TCGCGCGCGC GACGCTGATG CATCTGACCG GCTTGCCGGC GCAGGCGTGG GCGTTGCCGG CCGATGCGGT GAGCGTCGCC GCGCCGGGCA AGCACGCGGA CGAAGCGCGC GTGCTTGCGC GCGGGCATTG GGACGCGCTG CGCACGCGCG TGCTCGATGC GCTCGCGGCA TTCCATCAGC GCTCGCCGGA CGAGCAGGGG CCGGATGTCG CGCGGCTGCG CCGGATCGCC GCGCCGCTCG CGGACGACGC GTTGTGGCGC GCGCTGACCG ATGCGCTGAT CGCCGAGGGC GCGATCGTGC GCAGCGGCCC GTGGCTGCAT GTGCCGTCGC ATGCGGTGAG CTTCGACGCG GCCGAGGAGG CGTTGGCCGG GCGCTTGCTG CCGCTCGTCG CGGCGGGCCG CTACGATCCG CCGTGGGTGC GCGATCACGC GGCGGCGACG CTCATGGCGG AGGACGCGGT GCGCGTGCTG CTGCGCAAGC TCGCGCGGCG CGGCGACGTG CATCAGGTCG TGCGGGATCT GTTCTATCAC CGCGACGTGA TCGCGGAGCT TGCGCGACTG ATCGCGCGAC TCGCGGGCGA GCACGGCGGC GGGCTCGATG CGGCGACGTT TCGCGACGCG ACCGGGCTCG GCCGCAAGCG GGCGATTCAA ATTCTCGAGT TCTTCGATCG CGTTGGGTAT ACTCGCTTCC ACCGCGACCT GCACTGGTTG CGGGCTGATA GCCGGTTGCT GGCCGGCTCG CGGTAG
|
Protein sequence | MRAGADGPAR MIVGTAGHID HGKTTLVRAL TGVDTDRLKE EKARGISIEL GYAYTPLPNG DVLGFIDVPG HEKLVHTMAA GACGIDFALV VIAADDGVMP QTREHLSILQ LLGVAHGALA LTKCDRVDAA RVARVRDEIR AWLAASPLAD APVFETRASE PDDAGVAALN AHLRDTALAW RARRDDGLFR LAVDRVFTLA GQGTVVTGTA VAGRVRTGDS LAVARTGETV RVRSIHAQNR ATDVGHAGER CALNLAGIDK AALARGDAIV DARLATLSPR IDVELTLTAD ADLTITHWTP LHVHLGTLHR VAHVALLEGE TLGPGRRARA QLNFTEPVFA APGDRFIVRD AQATRTVGGG RVLDPFGPAR KRRTRARRAW LDALAAWLDE GRLDALLDEA PLGIARATLM HLTGLPAQAW ALPADAVSVA APGKHADEAR VLARGHWDAL RTRVLDALAA FHQRSPDEQG PDVARLRRIA APLADDALWR ALTDALIAEG AIVRSGPWLH VPSHAVSFDA AEEALAGRLL PLVAAGRYDP PWVRDHAAAT LMAEDAVRVL LRKLARRGDV HQVVRDLFYH RDVIAELARL IARLAGEHGG GLDAATFRDA TGLGRKRAIQ ILEFFDRVGY TRFHRDLHWL RADSRLLAGS R
|
| |