Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A2204 |
Symbol | |
ID | 4903337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 2153008 |
End bp | 2153730 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640145309 |
Product | type III secretion system protein HrpB |
Protein accession | YP_001076237 |
Protein GI | 126458283 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
TIGRFAM ID | [TIGR02499] type III secretion apparatus protein, HrpE/YscL family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACATGG CTTTTTGGCT GAAAAACCGG CAGATTCCGC TCGTCGACGA TCTGCGCATC GACGCGCCGC ACGGCGTGCT GCGCCGCGAC GCGTTCGAGA CGGTTCAGGC GCTCGGCGCC GCGCTCGACG CGCTCGCGGC GGAGCGCGAC GCGGTGCTGC GCGCGGCGCG CGACGATGCC GAGCGAATCG CCGCCGGCGC GCGCGCGCAA GCCGACGCGC TCGTCGAAGC CGCGCGGCGC GAGCACGACA GCGCCTACGC GCGCGGCTAC GACGCGGGCC GCGCGCAGGC GATCGCCGAC TGGCACGCGC GGGCGGCCGA TTCGTTCGAG CAGGAGCGGC GCGTGCGCGA CCGGATGCGC GAGCGGCTCG CGGAGCTCGT CGCCGCGGCC GTCCAGCAGA TGGTGCACAC GGAGGATGCG CGCGGCCTCT TCGCGCGCGC GGCGCAGACG ATCGAGCGCG TCGTCGCCGG CGCGAGCTAT CTGACGGTGC GCGTGTGCGA CGCCGATTAC GACGCGGCGC GCGAGCAGTT CGGCCTGCTT GCCGACGCAT GGCGCCGGCA AGGGCGCAAC GTGCCCGTCG ATGTCGTCGT CGAGCCGCGC GTCGCGCGCG GCACCTGCGT GTGCGAATCC GATTTCGGCA CCGTCGACGC GAGCCTCGAT ACCCAGCTGA ACGCGATCCG CGCGGCGCTC GCCCGCGCGC TCGACGACGC GGGGCGCGCA TGA
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Protein sequence | MDMAFWLKNR QIPLVDDLRI DAPHGVLRRD AFETVQALGA ALDALAAERD AVLRAARDDA ERIAAGARAQ ADALVEAARR EHDSAYARGY DAGRAQAIAD WHARAADSFE QERRVRDRMR ERLAELVAAA VQQMVHTEDA RGLFARAAQT IERVVAGASY LTVRVCDADY DAAREQFGLL ADAWRRQGRN VPVDVVVEPR VARGTCVCES DFGTVDASLD TQLNAIRAAL ARALDDAGRA
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