| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2166 |
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| Symbol | |
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| ID | 4904584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 2120305 |
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| End bp | 2121987 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640145271 |
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| Product | putative type IV pilus protein |
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| Protein accession | YP_001076199 |
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| Protein GI | 126458207 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0422322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTCG TGCTTTCGCG CCGCCGCGCG CGCGGCTTCG CGCTGATCGA GATGCTCGGC
GCGCTCGCGA TCGCCGCGCT GCTGCTTGCC GGCATCGCGG CGATGATGGA CAGCTCGCTC
GACGACGTGC GCGCGCAGCA GGCCGCGCAA TACCAGGCGC AGGTGACGGC CGCGGCCACG
CGTGCGCTCA AGCGTGACTA CGACGCATGG CTGCAGCGCG CGAACGCGCA GACGCCCGTC
GTGATGACGC TTGCCGATTT GCAGGCGACG AACGATCTGC CCGCCGCGCT ACAGACGCGC
AACGCGTACG GCCAGCACAC GTGCGTGCTC GTCAAGCGCA CCGCGAACGG CGTCGGACTC
GACGCGCTCG TCGTGACGAC GGGCGGCGAG GCGATCGGCG ACAAGGAGCT CGGGCTCGTC
GCCGCGAGCG CGGGGCCGGG CGGCGGCTCG ATCGCCACGA GCGCGCCCGC GCTCGCGCGC
GGCGCGTTCG ACGCGTGGCG CATGCCGCTC GGCGCCTACC TCGGCGGCAG CTCGCCGACG
TGCGATCCGG CCGACGCCGC GCCGCCGAAC GCCGGCCATC TCGCCAACGA GATCTTCTTC
AACGGGCCGG GCCAGCAGAT CAACAGCGAT TACCTGTACC GCGTCGGCGT CGGCGGCCAT
CCGGAGGCGA ACGCGATGCA GGTGCCGATC TGGCTCACGC ACACGTTCGT CGAAGGCGCC
GCCGACGCGG CGAACTGCGG CGCGGCCGGC AGCTATGCGA ACGGCAAGCT CGGCGCGGAC
GCGGCCGGAC AGTTGCTGAG CTGCAGGAAC GGCGTGTGGC GCGGCGCCGG CGGTCACTGG
AAGGACCCGG TCAGGACGGC CGACGATCTG CCCACCGACG CATCGAACGA AACCGGCGAC
GTGCGCCTCA CGCTCGACAC GTTCCGCGCG TTCGCGTGGA CGGGCAACGC GTGGCAGGCG
CTCGCCGTGG ACCAGAACGG CAACATGATC GTGCCGGGCG TCGTCTCCGC GAACCAGTAC
GAGATCACCG GGCGCGTCGT CGTCAACACG CCGTGCGCGC CGGAGCCGAG CCGGCCGAAC
GCGGGGCTCG TGTCGATGGG CCAGGACGGG CAGGTGCTGT CGTGCCAGGG CGGCAAGTGG
CTGCCGCAAT CGGGGATCAA GATCGGCGGC ACCGAAACGG CGTGCGAGAT CCTGATGGAG
ACGCCCGGCG CGACGGATTT CTCGTGCGGG TACACCTACC GCGGCCCCTA TCCGAATCCG
CCGCTCATCA CCTACGAGCC CGACGGCACG TACACGTACA CGATCAACCG GCCGGTGAAG
CTCGACAACA ACGGGCTCAT CGCGGTGAGC GCGTACATGC ACATGAGCTA CGCGACGTGC
GCGCTGAAAG GGCGGGAAGG ACAGATGCGT CTCGTCGTCG ACGTGATCGA CGTTCAGAGC
AACCAGGTGA TCGCGCACAG CGAGGCGCAG TCGACGAAGC TGATCGAGGA CGCCGCGACG
ATCAACGTCA CGCTGAATCA GGCCGCCGAG CCGCGCAGCG GCTACACGGT CAGGCTGTCG
AGCAAGTGGG CGACGTACGA CAGCTATGCG GGCACGCCGT GGACGTCGAG CTATTGCAGC
GGCGGCAAGA CGTTTCTCCA GACGCCGCTC GTGACCGGCT GGACGATCAA TTCGTTCTAT
TGA
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| Protein sequence | MRFVLSRRRA RGFALIEMLG ALAIAALLLA GIAAMMDSSL DDVRAQQAAQ YQAQVTAAAT
RALKRDYDAW LQRANAQTPV VMTLADLQAT NDLPAALQTR NAYGQHTCVL VKRTANGVGL
DALVVTTGGE AIGDKELGLV AASAGPGGGS IATSAPALAR GAFDAWRMPL GAYLGGSSPT
CDPADAAPPN AGHLANEIFF NGPGQQINSD YLYRVGVGGH PEANAMQVPI WLTHTFVEGA
ADAANCGAAG SYANGKLGAD AAGQLLSCRN GVWRGAGGHW KDPVRTADDL PTDASNETGD
VRLTLDTFRA FAWTGNAWQA LAVDQNGNMI VPGVVSANQY EITGRVVVNT PCAPEPSRPN
AGLVSMGQDG QVLSCQGGKW LPQSGIKIGG TETACEILME TPGATDFSCG YTYRGPYPNP
PLITYEPDGT YTYTINRPVK LDNNGLIAVS AYMHMSYATC ALKGREGQMR LVVDVIDVQS
NQVIAHSEAQ STKLIEDAAT INVTLNQAAE PRSGYTVRLS SKWATYDSYA GTPWTSSYCS
GGKTFLQTPL VTGWTINSFY
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