| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2012 |
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| Symbol | nirK |
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| ID | 4905677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 1979336 |
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| End bp | 1980886 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640145117 |
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| Product | nitrite reductase, copper-containing |
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| Protein accession | YP_001076045 |
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| Protein GI | 126457765 |
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| COG category | [C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants
[COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR02376] nitrite reductase, copper-containing |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.220926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGACC TGCAATCGAT CCGTGGCCAA CTGCGCGCCA CGTTCCTGTC CGTCCTGCTC
GGCGCGGTGA TCGCGGCGAG CGCGCAGGCG GGCGCCGCCA CGGGCAAGGT GCCCGGCGAT
TTCGGCCCGC CGCAGGGCGA GCCGCTTCAC GCGACGCTCG TCAGCCCGCC GAACGTGCCG
CCGCCGATTA CGCGCCGCTA CCCGGCGAAG GTCATCGTCG ATCTCGAAGT GGTCGAGAAA
GTGCTGCCGA TCGCCGACGG CGTGAACTAC ACGTTCTGGA CCTTCGGCGG CGCGGTGCCC
GGCAACTTCA TCCGCGTGCG GCAAGGCGAC ACGGTCGAAT TCCATCTCAA GAATCGTCCG
GACAGCAAAA TGCCGCACAA CATCGATCTG CACGCGGTGA CGGGCCCGGG CGGCGGCGCG
ACGTCGAGCT TCACCGCGCC GGGCCACGAA TCGCGCTTCA CGTTCAAGGC GCTCAACGAG
GGGCTCTTCG TCTATCACTG CGCGACCGCG CCCGTCGGCA TGCACGTCGC GAACGGGATG
TACGGCCTGA TTCTCGTCGA GCCGCCCGAG GGACTGCCGA AGGTCGACCG CGAATACTAC
GTGATGCAGG GCGACTTCTA CACGAACGGC AAGTATCGCG AGAAGGGCCT GCAGTCGTTC
GACATGGACA AGGCGATCGA CGAGCGCCCG ACCTACGTCG TCTTCAACGG CGCCGAAGGC
GCGCTGACGG GCGAGCGTGC GATGCGCGCG CGCACCGACG AGACGGTGCG CCTGTTCGTC
GGCAACGGCG GCCCGAATCT CGTGTCGAGT TTCCACGTGA TCGGCGCGGT GTTCGACAAG
GTGCGCGCGG ACGGCTCGAA CGTCACGCAA AACGACGTGC AGACAACGCT GATTCCGGCC
GGCGGCGCGG CGACGATCGA ATTCCACACG CGCGTGCCGG GCAACTACAC GTTCGTCGAT
CACTCGATCT TCCGCGCGTT CAACAAGGGC GCGCTCGCGA TCCTGAAGGT GGACGGCCCG
GAGAACAAGG CGATCTATTC GGGCAAGGAG CTCGACGCGC CGTACAGCGG CGACGCCGTC
ACCGCGGCGG CGGGTTCGGG CCCGGCCGGC GCGCCCGGCG CCGCGGCCGG CGTGAAGGGC
GGCGCCTCGC CCGTCAGGAC GAGCGCCGCC GCGAGCGCCG CGCCGCTGTC GCTGCCCGCG
CAGGTGAAAG CGGGCGGCAC GGTGTTCGCG AGCACCTGCG CGGTGTGCCA CCAAAGTGCC
GGCACCGGCC TGCCGGGCGT GTTCCCGCCG CTCGCCGGCT CCGACTTCCT CGCCGCGAAC
CCGAAGCGCG CGATCGGCAT CCTGCTGCAC GGCCTGAACG GCAAGGTGAC GGTCAACGGC
CACGACTACG ATTCGGCGAT GCCGCCGATG GCGCAACTGA CCGACGACGA AGTCGCGAAC
GTGCTGACCT ACGTGCTGAA CAGCTGGAAC AATCCGGGCG GCCGGATCAG CGCGGACGAA
GTCTCGAAGG CGCGCGCGAA GGCGCCGGCC GTCGCCGAGG CGGCGCACTG A
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| Protein sequence | MKDLQSIRGQ LRATFLSVLL GAVIAASAQA GAATGKVPGD FGPPQGEPLH ATLVSPPNVP
PPITRRYPAK VIVDLEVVEK VLPIADGVNY TFWTFGGAVP GNFIRVRQGD TVEFHLKNRP
DSKMPHNIDL HAVTGPGGGA TSSFTAPGHE SRFTFKALNE GLFVYHCATA PVGMHVANGM
YGLILVEPPE GLPKVDREYY VMQGDFYTNG KYREKGLQSF DMDKAIDERP TYVVFNGAEG
ALTGERAMRA RTDETVRLFV GNGGPNLVSS FHVIGAVFDK VRADGSNVTQ NDVQTTLIPA
GGAATIEFHT RVPGNYTFVD HSIFRAFNKG ALAILKVDGP ENKAIYSGKE LDAPYSGDAV
TAAAGSGPAG APGAAAGVKG GASPVRTSAA ASAAPLSLPA QVKAGGTVFA STCAVCHQSA
GTGLPGVFPP LAGSDFLAAN PKRAIGILLH GLNGKVTVNG HDYDSAMPPM AQLTDDEVAN
VLTYVLNSWN NPGGRISADE VSKARAKAPA VAEAAH
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