Gene BURPS1106A_A1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A1981 
Symbol 
ID4905465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp1949303 
End bp1951642 
Gene Length2340 bp 
Protein Length779 aa 
Translation table11 
GC content73% 
IMG OID640145087 
Productoxidoreductase NAD-binding/FAD-binding 
Protein accessionYP_001076015 
Protein GI126457984 
COG category[P] Inorganic ion transport and metabolism
[S] Function unknown 
COG ID[COG0369] Sulfite reductase, alpha subunit (flavoprotein)
[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.22456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGCC AGCTTCATTC GATTCCCGGC CTGATCGCCG CCGCGCTCCT GATCGTCGTC 
ACGCTGACGG GCGCGGCGCT GTCGATCCAG CCCGCGCTCG AGCGCGCGGC CGTCGCCGGC
CCCCCGCGCG CGCCGCTCGA CGTCGCGACG CTCGCCGGCC GCGTGAGCGC GCAGGTGCCG
GGCGTCGAGA AGCTCGTGCG CCGGCCGTCC GGCGAAATCG TCGCGTACTA CGCGGGCACC
GACGGGCCGC GCGCATCGAT CGTCGATCCG TCGACCGGCG CGCCGCTCGC CGATTATCGC
CCGTCGCCCG TCGTGCGCTG GCTCACGAAC CTGCACCGCA AGTTCCTGCT CGGCGACGCC
GGGCGGATCG CGACGGGCGT GACCGCCGCC GCGATGCTGT TCATCGCGCT GTCCGGGCTC
GCGCTGCTCG CTCACCGGAT GGGCGGCTGG CGGCGCCTGG CGGGCCCGAT TCGCGGCGAC
GGATTGCAGC GGCTGCACAA CGAGACCGCG CGCGTCGCGC TCGCGGGGCT CGTGCTGTCG
GCGTTGACCG GGCTGGTGCT GTCGCTGTCG ACGTTCGGCG TGATTCCCGA GCGCGGCGCG
GCGTCGGCGC TCGCGCTCGA CGCGCGCCCG GGCATCGCCG CCGCGGCGAA GGCGCCGATA
CCCATCGCGC AAATGGCCGC GCTGCGCGCC ACTGATTGGT CGACGCTGCG CCAACTGAGC
TTTCCCGCGC CGGACGAGCC GCGCGGCCTG ATCGAATTGA AGACGACCGA CGGCGCCGGC
TTCGTCGATC CGGCGACGGG CGCCGCGCTC GCCTACCAGC CCGCAGACGG CTGGCAGCGC
CTGCACGCGC TCGTGAAGAT GCTGCACACG GGCGAAGGAT TGTGGTGGCT CGGGCTCGTG
CTCGGCGCAT CGTCGCTCGC CACGCCGCTG CTCGCGGTGA CGGGCGTGAT GCTGTGGGCG
CGCCGGCGGC GCGCGCAGCC CAAGCGCGCC GGCGATGCGC CGGCGCGCGA CGCGGACACC
GTGCTGCTCG TCGGCAGCGA AGGCAACAGC ACCTGGGGCT TCGCGTCGGC GCTGCAAGCG
GCGCTCGCGC AGGCGGGCCG GCGCGTGCAC GTCGCACCGA TGAACGACGG CGCTCGCGGC
TACCCCGCCG CGCGGCACGT GCTCGTGCTG AGCGCGACCT ACGGCGACGG CGACGCGCCC
GGCAACGCGC AGTCATTCCT GCCGAAGCTC GCGCGGCTGT CGGCGGGGCA AGGCGCGTCA
TTCGCGGTGC TCGGTTTCGG CGATCGCCAG TTTCCGCGGT TTTGCGGCTA CGCGCGAAGC
GTCCATGACG CGCTCGTCGC GAAAGGCCTG ACACCGCTGC TCGATCTCGG CACCGTCGAC
AGGCAATCGG AGCCCGAATT CCGCGCGTGG TGCGCGCGGC TCGGCGATGC GCTCGGGCTC
GCGCTCGACG TCCGCCATGC GCCGACGCTG CCGCGCACGA TGCCGCTCAC GCTCGTCGAG
CGCGACGACT ACGGCGGCGA TCCGCGAGCG ATGACGTCGG TGCTGCGCTT CGCGCCCGCC
GGGCGAGATG GCCGCACCGG CCGCGCGGAC CGGGCCGGAC GTGATGAACA CGATGAACGC
GATGGGCGTG AACGACGTCA AGAACGCGAA GAACGGCTCG AGGATGCCGG CCGGCGGGCC
GCATGGTGGA CGGCGTTCGC GCGGCGGCGG CTGCCGTCGT TCGAAACCGG CGATCTGCTC
GGCGTCGTGC CGCCGGGCGA AGCTTCGCCG CGCTACTACT CGCTCGCAAG CGCCTCGTCG
GACGGCATCG TCGAGATCTG CGTGCGCCGC CATCCGCACG GCGTGTGCTC GCGCTATCTG
ACCGGCCTGC AACCGGGCGA CACGATCGAG GCGTTCGTTC GCCCGCATGC GCGCCTGCGT
CCACACGCGG GCGCGGCGCC GGTGATCCTG ATCGGCGCGG GCACCGGCAT CGGCCCGCTG
ATCGGCTTCA TCCGGCACAA CGCCGCGCGC CGCCCGATGC ACTTGTACTT CGGCGCGCGC
AACGCGAACG ACGGCTTCCC GTACCGTGAC GAGCTCGACG GCCTCGTGCG CGACCGCCGG
CTGCGCGCGC TGACGACCGC GTTCTCGCGC GCGGAGCGCG GAGCCTACGT GCAGGACCGG
CTCGTCGCCG ACGCGCGCAA CCTGCGCGAG CTCGTCGCGC ACGGCGCACA AATCATGGTG
TGCGGCGGCC GCGCGATGGC CGACGGCGTC GCGCGCGCGT GGGAGCGCAT CCTGGCGGAT
TCCGGCTCGT CCGTCGCGCA ATTGAAGCAG CAGGGGCGCT ATGTCGAAGA CGTCTATTGA
 
Protein sequence
MLRQLHSIPG LIAAALLIVV TLTGAALSIQ PALERAAVAG PPRAPLDVAT LAGRVSAQVP 
GVEKLVRRPS GEIVAYYAGT DGPRASIVDP STGAPLADYR PSPVVRWLTN LHRKFLLGDA
GRIATGVTAA AMLFIALSGL ALLAHRMGGW RRLAGPIRGD GLQRLHNETA RVALAGLVLS
ALTGLVLSLS TFGVIPERGA ASALALDARP GIAAAAKAPI PIAQMAALRA TDWSTLRQLS
FPAPDEPRGL IELKTTDGAG FVDPATGAAL AYQPADGWQR LHALVKMLHT GEGLWWLGLV
LGASSLATPL LAVTGVMLWA RRRRAQPKRA GDAPARDADT VLLVGSEGNS TWGFASALQA
ALAQAGRRVH VAPMNDGARG YPAARHVLVL SATYGDGDAP GNAQSFLPKL ARLSAGQGAS
FAVLGFGDRQ FPRFCGYARS VHDALVAKGL TPLLDLGTVD RQSEPEFRAW CARLGDALGL
ALDVRHAPTL PRTMPLTLVE RDDYGGDPRA MTSVLRFAPA GRDGRTGRAD RAGRDEHDER
DGRERRQERE ERLEDAGRRA AWWTAFARRR LPSFETGDLL GVVPPGEASP RYYSLASASS
DGIVEICVRR HPHGVCSRYL TGLQPGDTIE AFVRPHARLR PHAGAAPVIL IGAGTGIGPL
IGFIRHNAAR RPMHLYFGAR NANDGFPYRD ELDGLVRDRR LRALTTAFSR AERGAYVQDR
LVADARNLRE LVAHGAQIMV CGGRAMADGV ARAWERILAD SGSSVAQLKQ QGRYVEDVY