| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1968 |
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| Symbol | |
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| ID | 4903567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 1934299 |
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| End bp | 1937703 |
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| Gene Length | 3405 bp |
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| Protein Length | 1134 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640145074 |
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| Product | Rieske family iron-sulfur cluster-binding protein /carboxynorspermidine decarboxylase |
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| Protein accession | YP_001076002 |
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| Protein GI | 126458140 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.278028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCACC CCGACGCAGA TCAAGAACAC GAAAGACAAC TGATTGCATG TGGGCGTGAA
CAATACGAAT GGGTGGTCCG CGCGCGCGAG GCAGCCGCGT CGTCGCTGGC CGACTGGGAC
GCGCGGGCCG AGGCCCTGCT CGACGGCGTA CGCGGGATGC CCGCGCATTT CGACCATGCC
GCCGCGCGCT ACGCGGCACG AACCGGCGAG CCGTTGACGC TCGACCACGC GCGCGCGTTC
TGCGCGGCGA CGATGCTGCG CGCGGTCGAA CACCCCGCCG GAACCGACGA CTGGCATCTC
CTTTGCCGAT TGGACGAGAT ACCGGACATC GGCGACTACG TCACGGGCTA CGCGTTTCAG
GAAAGCATGA CGGCGGTCCG CGCGAGCGAG CACGAGGTCC GCGTGTTCCT GAACGTCTGC
CCTCATCGGC AGACGCAGCT CTTTCAGGCC GCCGGCTCGT TCGATCCGCA TCGGCACGTT
CGATGTCCGT ATCACGGCTG GACCTTCGAC GTCGACGGGC GCTGCGTGAA CGCGCCGGGC
GCGCGACGCT GCGAGTTCGG CGCGGACTTC CGCGAGCAGG ATTTTTCCCT GTCGCGCGTG
CCGGCTCGCA TCGAGGACGG CGGCATCCTC GTGCGCAAGG CGGTCTCGCG CGTCGGCCGC
CGCATGGCGG CGCTGTACGA GCGCGTGTAT TTCGCGTTCC CCGACGTCAA GCGCCCGTTC
GTGCCGGACC GCTTTCGCGT GCTGCTGCGC ATCGGCTTTC TCGCGGCCGA CATCCGGCAC
GCGCGCGATT CGTCGATCCT GTCGGCGCTT CGCGCCGAAC TGCGTCAGCA TCTGCTGACC
TATCCGGACC TGCCGGTGCG CTACGCGTCG CTCGCGAAAC GACATGGCGA GCCGACGGTC
GACGCCGTCG ATGCCGTCGA TGCCGTCGAT GCCGTCGATG CCGTCGATGC CGTCGATGCC
GTCGATGCCG TCGATGCCGT CGATGCCGTC GATGCCGTCG ACCTCGGCCC CCGGCTCGCG
GGCGGCCCGC TGCGCGAGAC CGTGGCCACC TGGGTCTACG GCGACGCGGA GTTGCACGCG
CTCGAACGGG ACACGCTCGT GCTGCCCGCG TGGCACTTCG TCGGCCACGT CGCGGAACTG
CGCGGCGGCG AGCGCACGTT GACGCTCGAC GTGTCGGGCG AGCGCGCATA CGTCTGCCGA
GCGCGCGACG GCACGATCCA TGCGGGCCGC CTCGTCGACA TCGACCGTCG CACCGACGAC
CCGGCACGGC TGCGCGCGGA CGGCGCGCTC GCGCCGATCG ACGTCGATGT CTGGCAGGGG
CTGATATTCG TGCGCCTCGC GGCCGGCCGG GGCGGGGTCG CCGATATCTG GGAGCATGCG
CGGATGCTCG AGCCATACCG GATCGGGCAG ATGGCGCCGC TCGCCGGCAA GGGCTGGTAC
GACTTCGCCG TCGAAGCGGA CGCGAAGATT CTCTGGGAAA ACTTCCTCGA GATGTACCAC
TTCCCGGCGG CGCACCAGGC GATGATCCGC TTGTTCGAGC TGTCGAGCCG CTCCGATCTG
CTGACGCTGC GCGAACCGGC CTCGACGCGG CTGTCGCCCA TCGAGGCGCG CTACCGCGAC
GCATTGAAAC GCGGCGCGAC ACACGGCGCG GACGAGGAAG CGCGGCAACG CGCGATGGCC
GATGGCGACG CCGCCCTCGC GCGCCCGCTC CAGCTGACCG TGTTCGGCTC GATTCCCGAA
ACGGCGCAAA CCGCGACGAT GCTCGGCATC ACGGTCTTTC CCGATCACAT TCAGGCGATG
TCGTTCACTC CGGTCGGCCC GCGGGAATGC CGCGTGAAGA TCCGCAGCTA CGGCCATGCC
GCGGAAGGCG CGCTCGACAT CGCACGGCAA TGCAACGTCG AGCAGTTGCA GATCGAACTC
GTCGAGGAAG ACATTCAGTT GAACCATCGA AGCCAGATCG CGGCATCGAC GCGCAGTTAC
GAGCGGCGCG GCGTGCTGCA CGACATGGAA GTGAGCGTCG CCGATTTCCA GCAGTTGCTG
CGGCGCGTCC TGCCCGTCAC ACGCTGCGTC CGGCGCCCGC CCGTCGGCGC GCTCGCGCGC
GCGAATCAAG CGCTCAGGCT GCGCGATCGC GACGAGCGCG GCGCGCCTCG CCGCGCCTGC
GCGGATGCGG CACGCCGCGC CCGCGCCCCC GCCGCCGCAT CGGCCTTTGC CGCGCCGCCG
CCTGTTTCTC GGCAACGCAA TGCCGAGACG CTCGAAGCAC TCGATACGCC CGCGTTCGTC
TACGACGAAC GCACGCTGCG CGACGCATTG TCTTCGATGC ACACGCTGCT CGGCGACAGC
GGCTGCCGCC TGCTGTATCC GCTCAAGCCG TTTTCGCACG CGGGCGCGCT CGAATGCATC
GGGCCGCATG TCGACGGCTT CGCCGCGTCG TCGCCGTTCG AGGCCGCGTT CTCGCGCATG
CTTCTCGGCC GCGCGGGCTC GGTCCACCTC GCGACGCCGG CGCTGCGCGA CCGCGACCTC
GGGACGATCG TCGACAACTG CGACTACGTC GCGCTGAACT CGCTGTCGCA ATGGCGGCGC
CTGCACGATG CATTGGCGGG CCGCCTGTCG TGCGGCTTGC GGATCAATCC GCAATATTCG
GTCGTGGCCG ACGCGCGCTA CGATCCGTGC CGGCCGCATT CGAAGCTCGG CGTGCCGCTC
GACGCCATCG AGCGCGTCGT CGCGAGCGAT CCGCGCGCGC TGCACGGCCT GCAGGGCATT
CATTTCCACA CGAATTGCGA CTCCACCGAT TTCAGCCGGC TCGCCGAAAC GATCGAGCAC
CTCGAAAAGC GGCTCGCGCG CACGCTCGAC GGCCTCGCCT GGATCAATCT GGGCGGCGGC
TACATCGCGG ACGGCGCGCG ATACGTCGAC CGGTTCCGCG CGTGCGCGAA GCGGCTGCGC
GAGCATTTCG GCGTCGCGCT GTTCATCGAG CCGGGCGCGG CGATCGTGCG CGCGGCCGGA
ACGATCATCG CCTCCGTCGT CGACCTGTTC GACAGCGGCG GCATGCCGAT CGCCGTGCTC
GACACGACGG TCAATCACTA TCCCGAGGTA TTCGAATACC AGTTTCAGCC GGATGTCGAC
GGGCATCACC CGGCGCACGC GCACGCCTAC CTGCTGGCCG GCGCTTCGTG CCTCGCCGGG
GACGTGTTCG GCACCTACCG CTTCGACGCG CCGTTGAGGG TGGGCTCGCG GGTCGCGTTC
GTGAACGCGG GCGCCTACAC GCTCGTGAAG GCGCATCGCT TCAACGGCAT CAACCTGCCG
AGCGTCTATC GCAGGGGCGA GGACGGCGCG CTCGCCGCGG TCCAGCGGTT TTCCTACGAA
GATTTTCTTC GCCAAAACGG GGGGCTCGAC CATGCATATC CATGA
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| Protein sequence | MDHPDADQEH ERQLIACGRE QYEWVVRARE AAASSLADWD ARAEALLDGV RGMPAHFDHA
AARYAARTGE PLTLDHARAF CAATMLRAVE HPAGTDDWHL LCRLDEIPDI GDYVTGYAFQ
ESMTAVRASE HEVRVFLNVC PHRQTQLFQA AGSFDPHRHV RCPYHGWTFD VDGRCVNAPG
ARRCEFGADF REQDFSLSRV PARIEDGGIL VRKAVSRVGR RMAALYERVY FAFPDVKRPF
VPDRFRVLLR IGFLAADIRH ARDSSILSAL RAELRQHLLT YPDLPVRYAS LAKRHGEPTV
DAVDAVDAVD AVDAVDAVDA VDAVDAVDAV DAVDLGPRLA GGPLRETVAT WVYGDAELHA
LERDTLVLPA WHFVGHVAEL RGGERTLTLD VSGERAYVCR ARDGTIHAGR LVDIDRRTDD
PARLRADGAL APIDVDVWQG LIFVRLAAGR GGVADIWEHA RMLEPYRIGQ MAPLAGKGWY
DFAVEADAKI LWENFLEMYH FPAAHQAMIR LFELSSRSDL LTLREPASTR LSPIEARYRD
ALKRGATHGA DEEARQRAMA DGDAALARPL QLTVFGSIPE TAQTATMLGI TVFPDHIQAM
SFTPVGPREC RVKIRSYGHA AEGALDIARQ CNVEQLQIEL VEEDIQLNHR SQIAASTRSY
ERRGVLHDME VSVADFQQLL RRVLPVTRCV RRPPVGALAR ANQALRLRDR DERGAPRRAC
ADAARRARAP AAASAFAAPP PVSRQRNAET LEALDTPAFV YDERTLRDAL SSMHTLLGDS
GCRLLYPLKP FSHAGALECI GPHVDGFAAS SPFEAAFSRM LLGRAGSVHL ATPALRDRDL
GTIVDNCDYV ALNSLSQWRR LHDALAGRLS CGLRINPQYS VVADARYDPC RPHSKLGVPL
DAIERVVASD PRALHGLQGI HFHTNCDSTD FSRLAETIEH LEKRLARTLD GLAWINLGGG
YIADGARYVD RFRACAKRLR EHFGVALFIE PGAAIVRAAG TIIASVVDLF DSGGMPIAVL
DTTVNHYPEV FEYQFQPDVD GHHPAHAHAY LLAGASCLAG DVFGTYRFDA PLRVGSRVAF
VNAGAYTLVK AHRFNGINLP SVYRRGEDGA LAAVQRFSYE DFLRQNGGLD HAYP
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