Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A1422 |
Symbol | |
ID | 4905499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 1383555 |
End bp | 1386200 |
Gene Length | 2646 bp |
Protein Length | 881 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640144528 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001075456 |
Protein GI | 126457129 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCAA TCTGCAATCG CCGCCCCCGC CGCGCGCACG CCGGCGTGTG CGCGGATACG GCGAACGCGC CGGCCGGTTT GCCCGAGGCG GCTCAGCCCG CCGCGCGGCT CGGCGCAGGC CGGCCGCGCG ACGCGGCCGC GCCGCGATGC GCGCGGCAAG CCACATCGCA CACATCGCAC GCGTCGCACA CGTTGCACGC GCCGTGCATG CCGCAATTCG CCCCGCGCCG CGTCGTCGCG CGCGTGGCCG CCGCCGCGCT GTTCTCCGCG TGCGCCGCGC CGGGCGTATC GGGCGCGGCC GAGCCGGCCG CCGCGACGCG CGGGTACGAC ATTCCGGCGG GCCCGCTCGA CGCGGCGCTG ACCCGCTTCG GCCGCGAGGC CGGCATCCTG CTGTCGTTCC CGGGCGAGCT GACCACGGGC CTGCGAAGCC CCGGGCTGCA CGGCCGCGCG GATCCGGCCG CGGCGCTCGA CCGGCTGCTG ACGGGCACGG GGCTCGTCGC GCTCCGGCAG CCGAGCGGCG GCTACACGCT CGCCAGACTG CCCGGGCCGG CCGCCGCCGG CGCCGATGCC GCGCTCGCGG CCGACACGAC GCTGCCCACC GTCGCCGTGC GCGCGAGCGG CCCGCACGCG GACAGCTACC GGCCGCCGCG CGAGGCGGCG GGGCTGCGCA GCGACGCGCC GCTCGCCGAG GTGCCGCAAG CGGTCGCCAT CGTCGCGCAG CAGGTGCTGC GCGACCAGCG CCCGCGCAAT CTCGACGACG CGCTTGCGAA CGTGAGCGGC ATCACGCAGG GCAACACGCT CGGCAGCACG CAGGACACGG TGATGAAGCG CGGCTTCGGC GACAACCGCG ACGGCTCGGT GATGCGCAAC GGAATGCCGA TCGTGCAGGG CCGCTCGCTG AACGCGACGA CGGACAGCGT CGAAGTGCTG AAGGGCCCGG CCTCGCTGCT GTACGGCATC ATGGACCCGG GCGGCGTGAT CAACGTCGTC ACGAAGCAGC CGCAGCTCGC GCGCCGCCAC GCGATCTCGG CGCTCGGCTC GACGTACGGC GGCGGCAGGA ACGGCGGCGA GCTCACGTTC GACTCGACGG GCGCGATCGG CGAGTCGCGC GTTGCATACC GGCTGATCGT CGATCAGACG AACGAACAGT ATTGGCGCAA CTACGGCGAG CACCGCGAGA CGCTCGTCGC GCCTTCGCTC GCGTGGTACG GGCGCGATAC GCAGATGGTG CTGTCGTACG AGTACCGGCG CTTCCTGATG CCGTTCGATC GCGGCACCGC GCTCGATCCG CGCACGAACG CGCCGCTCGC GATCCCGGCG CGCCGCCGGC TCGACGAGCC GTTCAACGAC ATGCGCGGCG AATCGAATCT CGCGCAGCTC GCGATCGATC ATCAGCTCGC GCCGGACTGG AAGGTGCACG TCGGCTACAG CTACAATCGG GAGACCTACG ATGCGAACCA GATTCGCATC ACGGCGGTCG ATCCGCTCAA GGGCACGCTC ACGCGCAGCA ACGACGCGAC GCACGGCTCG CGCAGCACCG ACAGCTACGG CATCGCGTAC GTCGACGGCC GCGTGACGCT CGCCGGGATG CGGCACGACG TGCAGTTCGG CGTCGACGGC GAATACCGGC AGGTCTACCG CGCGGACATG CTGCGCCAGC CGATCAAGAC GCCGTTCAGC TATCTGAACC CGACGTACGG GCTCGTCCCG CCGTCGACGA GCGTATCGGC CTCCGACAGC GACCAGAGCG ACACGCTGCA CACCGCCTCG CTGTTCTTCC AGGACAGCAT CCATCTGAGC GAGCGGTGGA TGCTCGTCGG CGGCGCGCGC TGGGTCCGCT ACAGCCAGCT TGCCGGGCGC GGCCGGCCGT TCCAGGTCAA CACGAACCTG AGCGGCACGA AGTGGCTGCC GCGCGCGGGC ATCGTCTACA AGTGGAACGA CGCGCTGTCG CTGTACGGCA GCTACACGCA GTCGCTGAAG CCGACCTCGA AGATCGCGCC GATGGCGGGC GGCTACGTGA TCGACGGCTC GACCGCGCCC GAGGAAGGCG CGTCGTGGGA GCTCGGCGCG AAGCTCGACA TGCCGGGCGG CCTCGCCGGC ACGCTCGCGT TCTTCGACAT CGACAAGAAG CACGTGCTCG TCTCGCAATA CGACGACGCG ACGAACCAGA CCGCGTGGCG CACGTCCGGC CGCGCGCGCT CGCGCGGGAT CGAGCTCGAC GTGTCGGGGC GGATCGGCGC GCGCTGGAAC GTGATCGCGA GCTACGCGTA CATCGACGCG AAGACGACCG AAGATCCGCT GTACGCGGGC AACCGGCTGT GGAACGTCGC GCGGCACACG GCCTCGCTCG CGGCGGTCTA CGACGTGGGC ACGGTGCTCG GCGGCGACGA CCTGCGCATC GGCGCGGCGG GGCGCTACGT CGGCGCGCGC CCGGGCGATT CGGCCAACAG CTTCACGCTG CCGGCGTACG CGACCGCCGA CGCGTTCGCG ACCTACGACA CGCGGCTCGG CAAGCAGAAG CTGCAGTTCC AGCTCAACGT GAAGAATCTG TTCAACCGCA CGTATTACCC GTCGAGCGTG AACCGGTTCT TCGTGTCGGT GGGCGACGCG CGGCAGGTGT CGCTGCTGAC GACGCTGCAG TTCTGA
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Protein sequence | MDSICNRRPR RAHAGVCADT ANAPAGLPEA AQPAARLGAG RPRDAAAPRC ARQATSHTSH ASHTLHAPCM PQFAPRRVVA RVAAAALFSA CAAPGVSGAA EPAAATRGYD IPAGPLDAAL TRFGREAGIL LSFPGELTTG LRSPGLHGRA DPAAALDRLL TGTGLVALRQ PSGGYTLARL PGPAAAGADA ALAADTTLPT VAVRASGPHA DSYRPPREAA GLRSDAPLAE VPQAVAIVAQ QVLRDQRPRN LDDALANVSG ITQGNTLGST QDTVMKRGFG DNRDGSVMRN GMPIVQGRSL NATTDSVEVL KGPASLLYGI MDPGGVINVV TKQPQLARRH AISALGSTYG GGRNGGELTF DSTGAIGESR VAYRLIVDQT NEQYWRNYGE HRETLVAPSL AWYGRDTQMV LSYEYRRFLM PFDRGTALDP RTNAPLAIPA RRRLDEPFND MRGESNLAQL AIDHQLAPDW KVHVGYSYNR ETYDANQIRI TAVDPLKGTL TRSNDATHGS RSTDSYGIAY VDGRVTLAGM RHDVQFGVDG EYRQVYRADM LRQPIKTPFS YLNPTYGLVP PSTSVSASDS DQSDTLHTAS LFFQDSIHLS ERWMLVGGAR WVRYSQLAGR GRPFQVNTNL SGTKWLPRAG IVYKWNDALS LYGSYTQSLK PTSKIAPMAG GYVIDGSTAP EEGASWELGA KLDMPGGLAG TLAFFDIDKK HVLVSQYDDA TNQTAWRTSG RARSRGIELD VSGRIGARWN VIASYAYIDA KTTEDPLYAG NRLWNVARHT ASLAAVYDVG TVLGGDDLRI GAAGRYVGAR PGDSANSFTL PAYATADAFA TYDTRLGKQK LQFQLNVKNL FNRTYYPSSV NRFFVSVGDA RQVSLLTTLQ F
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