| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1403 |
|---|
| Symbol | |
|---|
| ID | 4904268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 1368779 |
|---|
| End bp | 1370176 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640144509 |
|---|
| Product | HPP family/CBS domain-containing protein |
|---|
| Protein accession | YP_001075437 |
|---|
| Protein GI | 126457333 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3448] CBS-domain-containing membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.202725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTCGTC GAGATCAGAT CGGGCGAATT GTACGCCGAT GCGCGCCGGC GCGCTCGCTC
GCGCGCATTT TCCGCATCCT GAAACGCCAA CGGCCGACCG CGCAATCGGC GGGGTCGGCA
ATTTATATCA CAATGACATA TAATTTCCGG CTCGTCGCGC GACCGATCGG CGCACCCTTC
CATTTACGTT ACGGCAGTCC GACCTTGTCC TCGTCCCTCG CGTTCGCTCA TCGCCTTGCC
CGCGGCCTCG TGCGCTGGCT TTGGCGCTTC GTCCCGATTC CGGTCACGCT CAGCCGGCGC
GAGCGCGTGC GCTCGTGCGC GGGCGCGCTC GTCGGCATCG GCTGCGTCGG CGTGACGATG
CGCGCGCTGC CGGGCCTCCC GGGCGACGTG CCGCTGCTCG TCGCGCCGAT GGGCGCGTCC
GCGGTGCTGC TGTTCGCGGT GCCGGCGAGC CCGCTCGCGC AGCCGTGGTC GCTGATCGGC
GGCAACCTCG TCGCGGCGAC GGTCGGCGTC GCGTGCGCGC AGTGGATCGC CGATCCCGTG
CTCGCCGCGT CGGTCGCGAT CGCGGGCGCG ATCGGCGCGA TGTTCGCGCT GCGCTGCGTG
CATCCGCCGT CGGGCGCGGT CGCGCTGACG GCCGTCGTCG GCGGCCCGGC CGTGCATGCG
CTCGGCTTTC GCTTCGTCGC CGAGCCGATC GCGCTGCAAT CGGCGGCGCT CCTCGGCGCG
GCGCTCGTCT ATCACGCGCT CACCGGCCAC CGCTATCCGC ACGGCGGCGC CGCGCGGCCG
CACGCCGACT CGAACGCGCA CGCGGCGGCC GCGCCGCTGC ACGCGCGCTT TGTGCGCGCC
GATCTCGAGG CGGCGCTGAA GAACCGCAGC GAATGGCTCG ACGTCGCGCC CGAGGATCTC
GAATCGCTGC TGCGCGAAAC CGAGCTGCGT GCATACGCGC GCACGTTCGA CGAGCTGTCG
TGCGCGGAGA TCATGTCGCG CCGCCCGATC AGCATCGCGC CCGACACGCC GCTGCCCGCC
GCGATGACGC TGCTCGAGCG GCACCGGATC AAGGCGCTGC CCGTGGTCGA CGCCGATGCG
CGCGTCGTGG GCATCGTCAC GCGCGCGGAC TTGTCGAAGG CCGCGCCTTA CGCGACGCCC
GGCTTCCTGC GCAACCTGTC CGCGCGACTG CCGCGCTCGC TCGTCGGCCC GGCGCTCGTC
GCGCGCGCGG TGATGAGCAC GCGCGTGCAC ACGGTGCGCA CGACGACGCC GATCGCCGAG
CTCGTGCCGC TGTTCGCCGA TCACGGCCAC CACCACATTC CGGTGGTCGA CGCGGACCAC
CAGCTCGCCG GCATCGTCAC GCAGGCGGAC CTGATCGCCG GGCTCTACCG GCAATCGCAG
GTGCGGCTCG CCGCGTGA
|
|---|
| Protein sequence | MIRRDQIGRI VRRCAPARSL ARIFRILKRQ RPTAQSAGSA IYITMTYNFR LVARPIGAPF
HLRYGSPTLS SSLAFAHRLA RGLVRWLWRF VPIPVTLSRR ERVRSCAGAL VGIGCVGVTM
RALPGLPGDV PLLVAPMGAS AVLLFAVPAS PLAQPWSLIG GNLVAATVGV ACAQWIADPV
LAASVAIAGA IGAMFALRCV HPPSGAVALT AVVGGPAVHA LGFRFVAEPI ALQSAALLGA
ALVYHALTGH RYPHGGAARP HADSNAHAAA APLHARFVRA DLEAALKNRS EWLDVAPEDL
ESLLRETELR AYARTFDELS CAEIMSRRPI SIAPDTPLPA AMTLLERHRI KALPVVDADA
RVVGIVTRAD LSKAAPYATP GFLRNLSARL PRSLVGPALV ARAVMSTRVH TVRTTTPIAE
LVPLFADHGH HHIPVVDADH QLAGIVTQAD LIAGLYRQSQ VRLAA
|
|---|
| |