Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A1190 |
Symbol | fliD |
ID | 4906149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 1133286 |
End bp | 1134809 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640144296 |
Product | flagellar hook-associated protein |
Protein accession | YP_001075225 |
Protein GI | 126455482 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGATCA CCCAGACGGG GACCACCTCG CAAAGCGATG TCTGGTCGCA AATTCAGGAC GCCGCGCAGT CGCTGATCAA CGGCGCGACG GGCAAGACGT CGATGGACGT GAGCGGGCTC GTATCGGTGC TCGTCAACGC GAAGACGGCG GGCCAGGCCG CGGAGATCAA GAACCAGGCG GCCTGGAACA GCACGCAGAT CTCGGCGCTC GGCGCGCTCA AGCTGGCGCT CAGCAACCTG AAGACGGGCG TCGAGCCGCT GTCGGACGGC ACGTTCGCGC AGAAATTCAC GTCGAAGGCG AGCGGCAAGG GGCTCGGCGC GACGATGGAC AAAGGCACGG TGGCCGGCAG CTACCAGGTC GAGGTCAAGC AGGTCGCGCG CTCGCAGACG CTCGTGTCCG CCGGTTTCGA TCCGAAGCAC ACGCTCGGCT CCGGCACGCT CACGCTCAAG CTCGGCGATC GCTCGACGTC GATCGACATC GACGCGACGA ACAACACGCC GGCCGGCATC GCGGCCGCGA TCAATTCGGC GAAGAACAAC CCCGGCGTGA CCGCGACGGT CGTGACGGGC ACCGACGGCG CGCACCTCGT GCTGCGCTCG ACCGCGTCGG GCAGCGCGAA CGTGATCAGC ATGAGCGTCT CGAACGTGAA GGACGACGCG GGCCTGTCGG GGCTCGCGGT CCAGTCGACG GCGGACGACA AGGGCGGCAA GTCGGCGATC ACGTCGGCGG GCGACGCCTG GAAGCAGAGC GATTTCGCGC AGGACGCGAT CGTCACGGTG GGCGGCGTGA TCACCGCGCG CAGCGCGGAC AATGCGGTCA AGGGCGTGAT CGCGGGCGTG ACGATCAATG TGACCGAGGA GGCGATCGGC GCGCCGCAGA CGCTGTCGAT CGCGCGCGAC ATCGACGGTC AGGCGCGCGC GGTGACGAAC TTCGTCGATC TGTACAACTC GATGATCGGC ACGATGGCGC AGCTCACGTC GTTCGACAAG ACGGCGAAGC CGGGGCAGCA GGGCGGCCCG ATGATCGGCG ATTCGATGCT CAACGGCATT CGCAATTCGC TTGCGCACAT CGTCGGCGGC GGCGTGCCGC ACGGCGAGAA CAAGCGCGCG TCGCTCGCGG CGCTCGGCAT CACGTTCGCG CGGCCCGGCG ACAAGCAGCC GGAAGGTTCG CTGATCGTCG ACAAGGCCAA GCTGAACGAA GCGCTGCAGA ACGATCCGCA GGCGGTCGAG GCGCTGTTCA ACAAGACGAA CGGCATCGGC ACGCAGATCA CGAAGGCGCT CGATGTGCAT CTGCGCAAGG ACGGTTCGTT CGACGTGCGC TCGAATGCGA TCGACCGCGA CATGAAGAGC ATCGCACAGC GCCAGGCGCG GCTCGAAACC TACGCGTCGC AGCTGACCGC GCAGTACAAG GCGCAGTTCA CCGCGCTCGA CGCGCTGATG GCGCGGATGC AGCAGAACAC CAACTATCTG ACGCAGTTGT TCGGCGGCGC GAACAGCTCG GGCGCGCTCG CGAACAACAA GTGA
|
Protein sequence | MAITQTGTTS QSDVWSQIQD AAQSLINGAT GKTSMDVSGL VSVLVNAKTA GQAAEIKNQA AWNSTQISAL GALKLALSNL KTGVEPLSDG TFAQKFTSKA SGKGLGATMD KGTVAGSYQV EVKQVARSQT LVSAGFDPKH TLGSGTLTLK LGDRSTSIDI DATNNTPAGI AAAINSAKNN PGVTATVVTG TDGAHLVLRS TASGSANVIS MSVSNVKDDA GLSGLAVQST ADDKGGKSAI TSAGDAWKQS DFAQDAIVTV GGVITARSAD NAVKGVIAGV TINVTEEAIG APQTLSIARD IDGQARAVTN FVDLYNSMIG TMAQLTSFDK TAKPGQQGGP MIGDSMLNGI RNSLAHIVGG GVPHGENKRA SLAALGITFA RPGDKQPEGS LIVDKAKLNE ALQNDPQAVE ALFNKTNGIG TQITKALDVH LRKDGSFDVR SNAIDRDMKS IAQRQARLET YASQLTAQYK AQFTALDALM ARMQQNTNYL TQLFGGANSS GALANNK
|
| |