Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A1140 |
Symbol | cefD |
ID | 4904621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 1093342 |
End bp | 1094499 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640144246 |
Product | isopenicillin N epimerase |
Protein accession | YP_001075175 |
Protein GI | 126458625 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCCC CACTGAAATC GTTGTTTCTT CTCGACCCGA GCGTGACCTA TCTGAACCAC GGCGCGTACG GCGCGACGCC GCGCCCGGTG TTCGAGCGCC ACGTGCAGTG GCAGTACGAG CTCGAACGCG AGCCGGTCGA TTTCCTGTCG CGCCGCTTCG CCGAACGCAT GGCGCAGGCG AGGGCGATAC TGGCCGAATA CGTGGATACC GAACGCGACA ATCTAGTATA TGTGAGCAAC GGCACCACGG GCGTGAACAT CGTCGCGCGC AGCCTCCCGC TCGGCCCGGG CGACGAACTG CTCACCACCG ATCACGAGCA CGGCGGCATC GAGCGGCTGT GGCGCTTCAC CGCGCAAAAG CGCGGGTTCG AGATCGTCCG GCACAAGGTG TCGCTGCCGG TGACGACGCA TGCCCGGTTC GTCGAGGATT TCTGGCGCGA CGTGACGCCG CGCACGCGCG CGATCCTGAT CAGCCAGCTG ACGTCGCCCA CCGCGCTCGT GTTTCCGGTT GCGGCGATCT GCGCGCGCGC GCGGGCGCGC GGCATCCTGA CGATCGTCGA CGGCTCGCAC GTGCCCGGGC AACTGCCGCT GTCGCTGCGC GAGATGGATC CGGATTTCTA TGTCGGCATC CTGCATAAAT GGGTGTGCGC GCCGAAGGGC AGCGCGTTCC TGTATGCGAG GCCGGACGTG CAGCCGCTTG TCGAGCCGCT CGTCGTCAGT TGGGGCTGGG AGCCGAAGAA CCCGGGGCCG TCGAAGTTCG TCGAGTATCA CGAGTGGCAG GGCAGCCGCG ACATCTCCGC GTTCCTGAGC GTGCCGAGCG CGATCGCGTT TCAGCGCGAG CACGACTGGG ACGGTGTGCG CAAGCGCTGC ATCGCGCTCG CGAGCGACGC GCAGCGCGAA GTGGCCGCGT TGACGCGCGA GCCGCTCTAC CATCCGCCGG GCGCGCACGA GTGGCACGGC CAGATGGTCT GCGCGCAACT GCCGCCGCAG ACGGACGACA TCGCGCTGCT TGCCCGCTTG CGCAACGAAT GCGGGATCGA CGTCTCGGTC GACCGTTTCG GCGGCCGGCC TCGCATCCGA GTGTCGATTC AGGGCTATAA CGGCCCGGAC GACGTCGATC GATTGCTCGG CAGTCTGAAG CAACTGCTGC GGCTTTGA
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Protein sequence | MTAPLKSLFL LDPSVTYLNH GAYGATPRPV FERHVQWQYE LEREPVDFLS RRFAERMAQA RAILAEYVDT ERDNLVYVSN GTTGVNIVAR SLPLGPGDEL LTTDHEHGGI ERLWRFTAQK RGFEIVRHKV SLPVTTHARF VEDFWRDVTP RTRAILISQL TSPTALVFPV AAICARARAR GILTIVDGSH VPGQLPLSLR EMDPDFYVGI LHKWVCAPKG SAFLYARPDV QPLVEPLVVS WGWEPKNPGP SKFVEYHEWQ GSRDISAFLS VPSAIAFQRE HDWDGVRKRC IALASDAQRE VAALTREPLY HPPGAHEWHG QMVCAQLPPQ TDDIALLARL RNECGIDVSV DRFGGRPRIR VSIQGYNGPD DVDRLLGSLK QLLRL
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