Gene BURPS1106A_A0937 details

Gene Information

• Locus tag: BURPS1106A_A0937
• Symbol: hpaR
• ID: 4903694
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: -
• Start bp: 914051
• End bp: 914488
• Gene Length: 438 bp
• Protein Length: 145 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640144043
• Product: homoprotocatechuate degradation operon regulator, HpaR
• Protein accession: YP_001074973
• Protein GI: 126456364
• COG category: [K] Transcription
• COG ID: [COG1846] Transcriptional regulators
• TIGRFAM ID: [TIGR02337] homoprotocatechuate degradation operon regulator, HpaR

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCGTA CGTTCGATCA CCGCAATCTG GCCATGCTGT TGCTCGAGGC CCGCGAAACG 
TTGATGGGCC GGTTCCGGCC GATCCTGAAG GAATTTGCGC TGACGGAGCA GCAATGGCGG 
ATCATTCGCG TGCTGGACGG CGAACCGTCT CATGAGCTCG AAGCCGGGCA GATCGCGAAG 
CGCTGCTGCA TCCTGAGCCC GAGCCTCACG GGCGTGCTGG AGAGAATGGA GCGCGACGGC 
CTGATTCGCC GCACGCGCGC GCAGGAGGAC CAGCGCAGGC TGATCGTCAG CTTGACGCCG 
CAAAGTTGCC AGCTCGTCAC GCAGATCAGC CCGCGCATCG ACGAGCAGTA TCGGCTCATC 
GAGCAGCGCT TCGGCGCGGA TGCGCTCGGC GAGGTGTACG CGGCGCTCGA CAAACTGATC 
GACGTCGGCG GCTCGTGA 

 

Protein sequence

MNRTFDHRNL AMLLLEARET LMGRFRPILK EFALTEQQWR IIRVLDGEPS HELEAGQIAK 
RCCILSPSLT GVLERMERDG LIRRTRAQED QRRLIVSLTP QSCQLVTQIS PRIDEQYRLI 
EQRFGADALG EVYAALDKLI DVGGS