| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0908 |
|---|
| Symbol | |
|---|
| ID | 4906378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 890291 |
|---|
| End bp | 891988 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640144013 |
|---|
| Product | trehalase |
|---|
| Protein accession | YP_001074943 |
|---|
| Protein GI | 226830784 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1626] Neutral trehalase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.291559 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCACGC CGCGGCATCG CCCGCTTCAT GTTGAAAATC CGTTCTATCG TCGCCTGCTG
AACGCGCCCG CGTGGGTCGC GCTCGTCGCC GCGGCCGGCA TCGGCTGCAC GAGCGCGACG
CTCGCCCGCG CCGATTCGTC GCCGGCGCAC GCGTCCACGG CCGCGGCCGT GGCGAGCGCC
GCATCCGCGC CGGGCGCCGC GTCGATTCCG CCGCCGCCGA GCCAGCTCTA CGGCGATCTC
TTTGTTGCGG TGCAAACCGC GCAGATCTTC GCGGATCAGA AGACCTTCGT CGATTCGACG
CCGAACGCCG ATCCCGCGAC GATCGTCCAG CTGTACCAGC AGCAGAAGGG CCAGCCGGGC
TTCTCGCTGA AGGCGTTCGT CGCGCAATAC TTCACGCCGC CGTCGGACGA ATCGGTGACG
CCGCCGCCGA ACCAGACGCT GCGCGAGCAC ATCGACTGGC TATGGCCGAA GCTCACGCGC
ACCACCACGA CGGCGCCGCC GTACAGCTCG CTGATTGCGC TGCCCAAACC GTACGTGGTG
CCGGGCGGGC GCTTCCGCGA AGGCTACTAC TGGGACACGT ACTTCACGAT GCTCGGCTTG
CAGGAGGCGG GCCGGGAAGA TCTCGTCGAC AACATGCTCG ACAACTTCGC GTACCTGATC
GACACCGTCG GCCACGTGCC GAACGGCAAC CGCAGCTATT ACGTGAGCCG CTCGCAGCCG
CCGTTCTTCG CGTACATGGT GACGCTCGCG GCGAAGGCCG AGGGCAATCG CGTCTATCAG
AAGTACCTGC CCGCGCTGCG CAAGGAGTAC GCGTACTGGA TGCAGGGCGA GCGCACCACG
CCGCGCGGCC AGGCGACGCG CAACGTCGTC GCGATGCCGG ACGGCTCGGT GCTGAACCGC
TACTGGGACG CGAGCGACAC GCCGCGCGAC GAGTCGTATC TCGAAGACGT GAAGACCGCG
CAGCAGGCGA GCGGCCGGCC GGCGGCGGAA GTCTGGCGCG ATCTGCGCGC GGCGGCGGAG
AGCGGCTGGG ATTTCAGCTC GCGCTGGTTC GGCGACAACC GCACGCTCGC GACGATCCGC
ACGACCGCGA TCGTGCCCGT CGACTTGAAC AGCCTGATGT TCAACCTCGA GACGACGATC
GTGAAGGGCT GCGCGGTGAC GCGCGATTTC GCGTGCGTCG CCGAGTTCGC CGGCCGCGCG
GGCAAGCGCG CGGTTGCGAT CAACCGCTAT CTGTGGAACC GCAACGGCTA TTACGGCGAC
TACGACTGGA AACTCGGCAA GCCGCGCGAC AACCTGTCGG CGGCGGCGTT GTATCCGCTG
TTCGCGGGCG TCGCGTGGCC GGAGCGCGCG AAGCAGACCG CGAAGAACGT GCAGAAAGCG
CTGCTCAAGC CGGGCGGGCT CGCGACGACG ACTTACGACA CCGCGCAGCA GTGGGACGCA
CCTAACGGCT GGGCGCCGCT GCACTGGATC GCGCTCGTCG GGCTGCGGCA CTATGGCGAG
AAGTCGCTCG CGGACGATAT CGGCACGCGT TTTCTTGCCG ACGTGAAGGG CGTGTACGCG
GCGCAGGGCA AGCTCGTCGA GAAGTACATC GTCGAAGGCG TGGGCACGGG CGGCGGCGGC
GGCGAGTATC CGCTGCAGGA CGGCTTCGGC TGGACCAACG GCGTGACGCT CAAGCTGCTC
GATCTGTACG GCGGCTGA
|
|---|
| Protein sequence | MVTPRHRPLH VENPFYRRLL NAPAWVALVA AAGIGCTSAT LARADSSPAH ASTAAAVASA
ASAPGAASIP PPPSQLYGDL FVAVQTAQIF ADQKTFVDST PNADPATIVQ LYQQQKGQPG
FSLKAFVAQY FTPPSDESVT PPPNQTLREH IDWLWPKLTR TTTTAPPYSS LIALPKPYVV
PGGRFREGYY WDTYFTMLGL QEAGREDLVD NMLDNFAYLI DTVGHVPNGN RSYYVSRSQP
PFFAYMVTLA AKAEGNRVYQ KYLPALRKEY AYWMQGERTT PRGQATRNVV AMPDGSVLNR
YWDASDTPRD ESYLEDVKTA QQASGRPAAE VWRDLRAAAE SGWDFSSRWF GDNRTLATIR
TTAIVPVDLN SLMFNLETTI VKGCAVTRDF ACVAEFAGRA GKRAVAINRY LWNRNGYYGD
YDWKLGKPRD NLSAAALYPL FAGVAWPERA KQTAKNVQKA LLKPGGLATT TYDTAQQWDA
PNGWAPLHWI ALVGLRHYGE KSLADDIGTR FLADVKGVYA AQGKLVEKYI VEGVGTGGGG
GEYPLQDGFG WTNGVTLKLL DLYGG
|
|---|
| |