| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0824 |
|---|
| Symbol | |
|---|
| ID | 4905611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 820004 |
|---|
| End bp | 821509 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 640143930 |
|---|
| Product | NfeD family protein |
|---|
| Protein accession | YP_001074860 |
|---|
| Protein GI | 126456811 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.826176 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGTT CCTCGCCGCG GCCGCCGCCC GCGCGCGGCA AACTCCCCGC GCGGCTCGCG
CGCGCGGCCG TGCTGATCGG CCTGCTGCTC GCATGCGCGG CGGTGGCCGG CGCCGCCGCC
GCCGCGCGCG CGCCCGTCGT CGTGATCCCG GTCGCGGGCG CGATCGGCCC GGCGAGCGCC
GATTTCGTCG TCCGCGGCCT CGAGCGCGCC GCGCGCGAGC ACGCGCCGCT CGCGATCGTC
CAGCTCGACA CGCCCGGCGG CCTCGACACC TCGATGCGGC AGATCATCAA GGCGATCGTC
GCCTCGGGCG TGCCCGTCGC CGCGTTCGTC GCGCCGGGCG GCGCACGCGC GGCGAGCGCC
GGCACCTATA TCGTCTATGC AAGCCACGTG GCGGCGATGG CGCCCGGCAC GAACCTCGGC
GCGGCGTCGC CCGTGCAGCT CGGCATCGGC GGCCAGGCGC CGGCGGGCGG GCGACGCGAG
CCTGCCGGCG CGCCCGGGGC GGCGGGCGCG GGTGCGACCG ATACGGAATC GATCGAAACC
CGCAAGGCGC TGCACGACGC GGCCGCTTAC ATCCGCGGCC TCGCGCAGTT GCGCGGGCGC
AACGCCGAAT GGGCGGAGCG CGCGGTGCGC GAGGCGGTGA GCCTGCCCGC GAACGACGCG
CTCGCACAGC ACGTGGTCGA CCTGCTCGCG AACGACCCGG CCGATCTCGC CGCGAAGCTC
GACGGCCGCA CGATCGTCAC CGCCACGGGC GCGCACCGGC TCGACACCGC GCAGGCGCCG
CTCGAGACGC TCGAGCCCGA CTGGCGCAGC CGGCTGCTCG CGACGATCGC CGATCCGAGC
GTCGCGCTCG TGCTCGTCAC GCTCGGCATG TACGGGCTCT TCTTCGAATT CGCGAATCCC
GGCTTCGTGC TGCCGGGCGT CGCGGGCGCG ATCAGCCTGC TCGTCGGCCT GTTCGCGCTG
CAATTGCTGC CGATCAGCTA CGCGGGCCTC GCGCTCGTGC TGCTCGGCAT CGCGTTCCTG
ATCGCCGAGA CGTTCCTGCC GACGTTCGGC GCGCTCGGCG TGGGCGGCAT CGTCGCGTTC
GCGATCGGCG CGCTGATGCT GATCGACACC GACGTGCCCG GCTACGGCGT GCCGTGGCCC
GTGATCGCGT CGCTCGCGGC CGCGGGCGCG ATCCTCGTGT TCGGCGTGTC GGGCTTCGCG
CTGCGCGCGC GCCGGCGGCC CGTCGTCACG GGCGCGGAGG CGATCGTCGG CAGCATCGGC
GAGGTGCTCG ACGACGGGCT CGTGCCCGAT CAGCCGCCGC AGATCGGCCC GAGCGCGGAC
CCGGGCGCGC CGCTCGCGCC GTCCGCGGCC GGCTGGGCGC GCGTGCACGG CGAGCGCTGG
CGCGTCGCGA GCGCGACGCC GATCGCGGCC GGCCGCCGCG TGCGCGTGAC GGGCCGCAAC
GGCCTCACGC TCACCGTCGC ACCGCTGTAC GACAACGTCG TTCCCCCACG AGGAGAGCCA
CCATGA
|
|---|
| Protein sequence | MPRSSPRPPP ARGKLPARLA RAAVLIGLLL ACAAVAGAAA AARAPVVVIP VAGAIGPASA
DFVVRGLERA AREHAPLAIV QLDTPGGLDT SMRQIIKAIV ASGVPVAAFV APGGARAASA
GTYIVYASHV AAMAPGTNLG AASPVQLGIG GQAPAGGRRE PAGAPGAAGA GATDTESIET
RKALHDAAAY IRGLAQLRGR NAEWAERAVR EAVSLPANDA LAQHVVDLLA NDPADLAAKL
DGRTIVTATG AHRLDTAQAP LETLEPDWRS RLLATIADPS VALVLVTLGM YGLFFEFANP
GFVLPGVAGA ISLLVGLFAL QLLPISYAGL ALVLLGIAFL IAETFLPTFG ALGVGGIVAF
AIGALMLIDT DVPGYGVPWP VIASLAAAGA ILVFGVSGFA LRARRRPVVT GAEAIVGSIG
EVLDDGLVPD QPPQIGPSAD PGAPLAPSAA GWARVHGERW RVASATPIAA GRRVRVTGRN
GLTLTVAPLY DNVVPPRGEP P
|
|---|
| |