| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0820 |
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| Symbol | |
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| ID | 4904340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 815969 |
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| End bp | 817759 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640143926 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001074856 |
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| Protein GI | 126455578 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities
[COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCCCC TTTCCGACGA AGCGCCGCTC GCGCTGTTCG AATCGGTTCA CACCGAAACC
GCCGTCGCGG CCGGCGACGT CACGCTCGCC GCGAAGACCT GGGGCGACGC GTCGCGCCCC
GCCGTCGTGC TCGTGCACGG CTATCCGGAC AACAGCGAAG TCTGGCGCCG CGTCGCGCCC
CTGCTCGCGA AGTCGTACTA CGTGATCGCC TACGACGTGC GCGGCGCCGG GCTGTCGACC
AAGCCCGCGC GCACGGCCGA CTATCGGCTC GAGCGGCTCG TCGACGATTT CGCGGCGGTG
ATCGACGCGC TCGCGCCGAA TCGCGCGGTG CACGTGGTCG GCCACGACTG GGGCTCGATC
CAGGGCTGGG AATTCGTCAC CGAGCCGCGC CTCGCCGGGC GCATCCTGTC GTACACGTCG
TGCTCCGGAC CGAATCTCGA TCACGTCGGC TACTGGCTGC GCCAGCAGCT CGCGCGGCCC
TCGCCCGCGT CGATCAAGCG CCTCGCCGGC CAGCTCGTGC GCTCATGGTA CGTGTACCTG
TTTCACCTGC CGCTCATCCC CGAGCTCAAC TGGCGCCTGT GGCTCGGCCG CGCGTGGCCC
GCGCTGATGC GCCGGCTCGA GCACACCGAC GTCGGCGTGC GCCCGACGCA GACCGAGGAC
GGCGTGCACG GCGTGCGCCT GTATCGCGCG AACTTCCTCC GCCGCGTGCT CGCGCCGCGC
GAGCGCTATG CGCACGCGCC CGTGCAAGTG GTCGTGCCGC TGCGCGACAA GTTCGTGAGC
CCCGCGCTGT CGGCCGACAT CGCGCGTTGG GTGCCGACCT ATTACCGCCG CGAAGTGGCC
GAGCGGCACT GGCTGCCGAT GTCGGAGCCG GCGCGCTTCG CCGCGCTCGC GCAGGAACTG
ATCGAGGCGG TCGAGACGGG CGTGCAGCCG CCCGCGCTCG CGCATGCGCG CCGCAGGAGC
GGCACGGGGC CGTTCGTCGG CAAACGCGTC GTGATCACCG GCGCGGGCAG CGGAATCGGC
CGCTGCGCGG CCGTCGAATT CGCGAAGCAG GGCGCGTCGA TCGTCGCCGT CGACATCGAC
GAGCAGGCGG CCGAGCGCAC CGCGCTGCTC GTGCGGCTGC TCGGCGCGCA GGCCGACGTG
CGGCGCGTGG ACGTCGGCTC GGCCGACGAC ATGGAGGCGC TCGCGAACTG GGTGGGCGAC
GAGCTGGGCG GCGCGGACGT CGTCGTCAAC AACGCGGGCA TCGGCATGGC GGGCGGCATC
CTCGACACGT CGGCCGCGCA TTGGGAGCGC ATCCTGCGCG TGAACCTGTG GGGCGTGATC
CACGGCTCGC GCCTGTTCGC CAAGCAGATG GCCGCGCGCG GCGCGGGCGG CCACATCGTC
AACACCGCGT CGGCGGCCGC GTTCGGCCCG TCGCGCGACC TGCCCGCGTA CGCGACGACG
AAGGCCGCGG TGCTGATGCT GAGCGAATGC ATGCGCGCGG AGCTCGCGGA CCACGGCATC
GGCGTGACGG CGGTGTGCCC CGGCTTCGCG GAGACCGGCA TCATGGCGTC GACCCAATAC
GCGGGCGCGA AGAGCGACCA GGACGAAGCG CGGCTGCGCA AGCGCGCGAC GAAGCTTTAC
CAGATGCGCG GCCTGAAGCC GGAGACCGTC GCGAAGGCGA TGGTCGACGG CGTGCTGCAG
AACCAACCCG TCGTCGCGAT CGGCGCGGAA GCGCATGCGA TGCGCTTCGT CGGGCGCTTC
GCGCCGTGGC TCGGCCGGCT GATCGCCCGC GTCAGCATGG CGTCGCACTG A
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| Protein sequence | MQPLSDEAPL ALFESVHTET AVAAGDVTLA AKTWGDASRP AVVLVHGYPD NSEVWRRVAP
LLAKSYYVIA YDVRGAGLST KPARTADYRL ERLVDDFAAV IDALAPNRAV HVVGHDWGSI
QGWEFVTEPR LAGRILSYTS CSGPNLDHVG YWLRQQLARP SPASIKRLAG QLVRSWYVYL
FHLPLIPELN WRLWLGRAWP ALMRRLEHTD VGVRPTQTED GVHGVRLYRA NFLRRVLAPR
ERYAHAPVQV VVPLRDKFVS PALSADIARW VPTYYRREVA ERHWLPMSEP ARFAALAQEL
IEAVETGVQP PALAHARRRS GTGPFVGKRV VITGAGSGIG RCAAVEFAKQ GASIVAVDID
EQAAERTALL VRLLGAQADV RRVDVGSADD MEALANWVGD ELGGADVVVN NAGIGMAGGI
LDTSAAHWER ILRVNLWGVI HGSRLFAKQM AARGAGGHIV NTASAAAFGP SRDLPAYATT
KAAVLMLSEC MRAELADHGI GVTAVCPGFA ETGIMASTQY AGAKSDQDEA RLRKRATKLY
QMRGLKPETV AKAMVDGVLQ NQPVVAIGAE AHAMRFVGRF APWLGRLIAR VSMASH
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