Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A0702 |
Symbol | |
ID | 4905205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 686334 |
End bp | 686861 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640143808 |
Product | hypothetical protein |
Protein accession | YP_001074738 |
Protein GI | 126456659 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.456269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAATG CTTTGGTTGA TTACTTCTTG CAGATCGATG GCGTCGAGGG TGAGTCGACC GATCAGCAAT ATCCCGGTCT GATCCAGATC CAGAGCTGGC AGTGGGCGGA AGAGAACTCG GGCCGCTGGG GCTTCGGCAG CGGCGGCGGC GCGGGCAAGG TCGAGATGAA GGACTTCGAG TTCCGCATGG TGTCGAACAA GGCGTCGCCG AAGCTGTTCC TGATGTGCGC GACGGGTGAG CACATCCAGA ACGCGAAGCT GATCTGCCGC AAGTCGGGCA AGGGCCAGCA GGAGTTCCTG ACGATCTCGT TCGCGAGCGG CCTCGTGTCG TCGTTCCGCA CGCTCGGCAA CATGCCGATC TCGCAGCTCG GTCACGCGAG CGGCGAAGTC GACGGCGTGC TGCCGACGGA TCAGATCCGC ATCAACTTCG CCCAGATCGA GTTCGAGTAC CGCGAGCAGC GCAACGACGG CACGATGGGC GCCGTGATCA AGGCGGGCTA CGACCTGAAG CAGAACGCGC CGATCTAA
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Protein sequence | MANALVDYFL QIDGVEGEST DQQYPGLIQI QSWQWAEENS GRWGFGSGGG AGKVEMKDFE FRMVSNKASP KLFLMCATGE HIQNAKLICR KSGKGQQEFL TISFASGLVS SFRTLGNMPI SQLGHASGEV DGVLPTDQIR INFAQIEFEY REQRNDGTMG AVIKAGYDLK QNAPI
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