Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A0603 |
Symbol | cpoF |
ID | 4903295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 590649 |
End bp | 591470 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640143709 |
Product | non-heme chloroperoxidase |
Protein accession | YP_001074639 |
Protein GI | 126455749 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.245002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACGA TCACGACGAA AGACGGTACG CGCATCTTCT ACAAGGACTG GGGCGCGGGG CGCCCGGTCG TGTTCTCGCA CGGCTGGCCG CTGAACGCGG ACGCGTGGGA CGCGCAGATG CTGTTCCTCG CGCAGCGCGG CTACCGCGCG ATCGCGCATG ACCGGCGCGG CCACGGCCGT TCCGGGCAAC CGGCGACGGG CAACGACATG GACACCTACG CGGACGATCT CGCCGCGCTG CTCGATGCGC TCGACCTGCG CGAAGCGACG CTCGTCGGTC ATTCGACGGG CGGCGGCGAA GTCGCGCGCT ACATCGGCCG CCACGGCTCG AAGCGCGTCG CGAAGGCGGT GCTGATCGGC GCGGTGCCGC CGATCATGCT GCAGACCGAA GCGAACCCGG GGGGCCTGCC GATGGAGGCG TTCGACGGCA TCCGCCGCGG GGTCGCCGGC AACCGCTCGC AGTTTTACCG CGACGTCGCG CTGCCGTTCT TCGGCTTCAA CCGGCCGGAC GCGCAGGTGT CGCAGGCGAC GATCGATGCG TTCTGGGCGC AGGGGATGAC GGGCGGGATT CTCGGCCAGT ACGCGTGCAT TCGCGAGTTC TCCGAAGTGG ATTACACGGC CGACCTGAAG AAGATCGACG TGCCGACGCT GATCCTGCAC GGCGATGACG ACCAGATGGT GCCGATCGAC GCGTCCGCGC GCCTGTCCGC GAAGCTCGTC GCCGGCGCGA CGCTGAAGGT GTATCCGGGC GGCTCGCACG GGATCTGCGT CACGCATGCG GACGAGGTCA ACGCGGATCT GCTCGCGTTC CTCGAATCCT GA
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Protein sequence | MDTITTKDGT RIFYKDWGAG RPVVFSHGWP LNADAWDAQM LFLAQRGYRA IAHDRRGHGR SGQPATGNDM DTYADDLAAL LDALDLREAT LVGHSTGGGE VARYIGRHGS KRVAKAVLIG AVPPIMLQTE ANPGGLPMEA FDGIRRGVAG NRSQFYRDVA LPFFGFNRPD AQVSQATIDA FWAQGMTGGI LGQYACIREF SEVDYTADLK KIDVPTLILH GDDDQMVPID ASARLSAKLV AGATLKVYPG GSHGICVTHA DEVNADLLAF LES
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