Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A0568 |
Symbol | rfbF |
ID | 4904774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 560711 |
End bp | 561487 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640143674 |
Product | glucose-1-phosphate cytidylyltransferase |
Protein accession | YP_001074604 |
Protein GI | 126457460 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | [TIGR02623] glucose-1-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGGCTG TGATTCTCGC AGGCGGATTC GGCACGCGAT TCACCGAAGA AACGATTTCC CGGCCGAAAC CGATGATCGA GATCGGCGGC AAGCCGATTC TCTGGCACAT CCTGAAGCTG TATTCGCACC ACGGCATCAA CGAGTTCATC ATCTGCTGCG GATACCGGGG CTACGTCATC AAGGAATATT TCGCGAACTA CTTCCTGCAC ATGTCGGACG TGACGTTCGA TGTGCAGAAG AACAGCATGG AAGTTCATTA CCGCTATTCG GAGCCGTGGC GCGTGACGCT CGTCGACACC GGCGAGACGA CGATGACGGG CGGGCGGATC CGCCGCGTGC GCCAGTACGT CGAAGGCGAC GACATGTTCT GCCTCACGTA CGGCGATGGC CTGTGCGACG TCGACCTCGG CCGCCTGATC GCATTTCACC GCGAGCACGG CGGCAAGGCG ACGCTCACCG CGGTGCATCC GCCGGCGCGC TTCGGCGTGC TCGATATCGG CGCGGACCGG CAGGTCGTCG ATTTCACCGA GAAGCCGCGG ATCGACGGCG GGATGATCAA CGGCGGGTTC TTCGTGCTGT CGCCTTCGGT CATCGATCTG ATCGACGGCG ACGCGACGGT GTGGGAACGC GAGCCGCTCG AGCGGCTCGC GCGGGCCAAC GAGCTGAAGG CGTATCCGCA CGACGGCTTC TGGCAATGCA TGGATACGTT GCGCGACAAG CTGCTGCTCG ACAGCATGTG GGCGACGGGC ACCGCGCCGT GGAAGAAATG GAGCTGA
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Protein sequence | MKAVILAGGF GTRFTEETIS RPKPMIEIGG KPILWHILKL YSHHGINEFI ICCGYRGYVI KEYFANYFLH MSDVTFDVQK NSMEVHYRYS EPWRVTLVDT GETTMTGGRI RRVRQYVEGD DMFCLTYGDG LCDVDLGRLI AFHREHGGKA TLTAVHPPAR FGVLDIGADR QVVDFTEKPR IDGGMINGGF FVLSPSVIDL IDGDATVWER EPLERLARAN ELKAYPHDGF WQCMDTLRDK LLLDSMWATG TAPWKKWS
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