| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0534 |
|---|
| Symbol | |
|---|
| ID | 4906023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 518895 |
|---|
| End bp | 520094 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640143640 |
|---|
| Product | bacteriophage/transposase fusion protein |
|---|
| Protein accession | YP_001074570 |
|---|
| Protein GI | 126456206 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAACGCC TGTTTCTGAT TCTGATCCTC GTGCCGACGA TGTTCCTCGC GGCCGGCTGC
GATAACGTCC CGGCCGGCTA CGTCGGTGTG AAGGTGCAAC GCTACGGCGA CGACCGCGGC
GTCAACGTCG AAGTGAAGGG GCCCGGTCGC TACTTCAACG GGCCCAACGT CGACATGTTC
ATCTTCCCGA CGTTCACGCA GTCCTACGTG TGGGACAAAG CTGGCAAGTC CGACGAGTCG
TTCACGTTCC AGACGGTGGA GGGCCTGTCG GTCAACACCG ACATCGGCGT CAGCTACGCG
ATCCCGCGTG AGAACGCGCC CAAGGTGTTC CAGAAGTATC GGCGCGGAGT CGATGAGATC
ACGGGCGTCT ACCTGCGCGC GATCGTGCGC GACGCCCTGA ATCTCGCCGG CGCGTCGATG
GCGGTCGAGG ACGTCTACGG CAGGGGCAAG GCGGCGCTAC AGCAGCGCGT CGAGGACGAG
GTAAAGGCGA ACGCCGCGAA GGTCGGAATC AGTGTCGAGA AGGTCTATTT CGTGAATCAG
ATGCGCCTCC CCGAGCAGGT CATGAACTCG ATCAACGGGA AGATCGCAGC GACGCAGATC
GCGCAGCAGA AGGAGAACGA ACTGCGTGCA GCCGAGGCGG ACGCGGCAAA GCAAGTCGCG
ATCGCCAAGG GCGAGGCCGA AGCGCTCGAG GTGAAAGCGA AAGCACTACG CGAGAACAGC
CAAATCCTGC AACAGATGGC GATCGAGAAA TGGGACGGCA AGCTCCCCCA GTACGCGCGC
CGCGTGGTGG GCTGGGCGTT TAGTCAGCAC GCGGACACCG ACTTGGCACT AAAGGCATTA
AGACGGGCTT ACGATCATCG TTGTCCGCCA CCAGGCCTGA TGTTCCATTC GGATCAGGGC
TGCCAATACA CGAGCACGCG CTTTCTCGCC GAGCTGCGCG CCCGTGGCAC GATCCAGAGC
ATGAGTCGGC GCGGCAACTG TTGGGACAAC GCGGTGGTCG AGCGCTTCTT CCGAAGCCTC
AAAAATGAAT GGATCGGCGA CCAGTTGTAC GTCGATCACC GCCATGCAGA GCAAGACATC
ACTGATTATC TAGTCGATTT TTACAACCAT CGTCGCCTTC ACTCGGCTGC GAAGGGACTG
CCGCCAGCGC GTTTCGAAGC GCTCGCAGCC TATCCCGGAG CAGTGTCCAA AGTTGCTTGA
|
|---|
| Protein sequence | MKRLFLILIL VPTMFLAAGC DNVPAGYVGV KVQRYGDDRG VNVEVKGPGR YFNGPNVDMF
IFPTFTQSYV WDKAGKSDES FTFQTVEGLS VNTDIGVSYA IPRENAPKVF QKYRRGVDEI
TGVYLRAIVR DALNLAGASM AVEDVYGRGK AALQQRVEDE VKANAAKVGI SVEKVYFVNQ
MRLPEQVMNS INGKIAATQI AQQKENELRA AEADAAKQVA IAKGEAEALE VKAKALRENS
QILQQMAIEK WDGKLPQYAR RVVGWAFSQH ADTDLALKAL RRAYDHRCPP PGLMFHSDQG
CQYTSTRFLA ELRARGTIQS MSRRGNCWDN AVVERFFRSL KNEWIGDQLY VDHRHAEQDI
TDYLVDFYNH RRLHSAAKGL PPARFEALAA YPGAVSKVA
|
|---|
| |